Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU92638 |
| length | 1100 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 3 |
| gene id | G78058 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 6529046 ~ 6615660 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578288.1 | lncRNA | downstream | 56870 | 6533450 ~ 6536271 (-) | True | LOC117597449 |
| TU92383 | lncRNA | downstream | 265056 | 6326099 ~ 6328085 (-) | True | G77840 |
| TU92381 | lncRNA | downstream | 268471 | 6323043 ~ 6324670 (-) | True | LOC117597343 |
| TU92334 | lncRNA | downstream | 303130 | 6289797 ~ 6290011 (-) | True | G77799 |
| TU92332 | lncRNA | downstream | 311717 | 6280999 ~ 6281424 (-) | True | G77797 |
| TU92799 | lncRNA | upstream | 461761 | 7077421 ~ 7107392 (-) | True | G78172 |
| TU92833 | lncRNA | upstream | 569773 | 7185433 ~ 7185732 (-) | True | G78203 |
| TU92894 | lncRNA | upstream | 661159 | 7276819 ~ 7292595 (-) | True | G78242 |
| TU92909 | lncRNA | upstream | 699037 | 7314697 ~ 7340303 (-) | True | G78255 |
| TU92914 | lncRNA | upstream | 726846 | 7342506 ~ 7343664 (-) | True | G78259 |
| XM_026927838.2 | mRNA | downstream | 26102 | 6563913 ~ 6567039 (-) | True | LOC113534869 |
| XM_026927839.2 | mRNA | downstream | 47199 | 6542433 ~ 6545942 (-) | True | LOC113534870 |
| XM_034304923.1 | mRNA | downstream | 60501 | 6528585 ~ 6532640 (-) | True | LOC113534867 |
| XM_026927830.2 | mRNA | downstream | 86351 | 6503829 ~ 6506790 (-) | True | LOC113534866 |
| XM_026927840.2 | mRNA | downstream | 107566 | 6482345 ~ 6485575 (-) | True | LOC113534871 |
| XM_034304926.1 | mRNA | upstream | 13311 | 6628971 ~ 6677161 (-) | True | LOC117597448 |
| XM_034304925.1 | mRNA | upstream | 92591 | 6708251 ~ 6715332 (-) | True | LOC117597447 |
| XM_026928349.2 | mRNA | upstream | 113281 | 6728941 ~ 6769726 (-) | True | uggt2 |
| XM_026928350.2 | mRNA | upstream | 113281 | 6728941 ~ 6769725 (-) | False | uggt2 |
| XM_034304698.1 | mRNA | upstream | 122492 | 6738152 ~ 6769727 (-) | False | uggt2 |
| TU92652 | other | downstream | 28104 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92645 | other | downstream | 28570 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92666 | other | downstream | 47188 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
| XR_004578179.1 | other | downstream | 268461 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92001 | other | downstream | 1253508 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| TU92785 | other | upstream | 428127 | 7043787 ~ 7046809 (-) | True | G78159 |
| TU93319 | other | upstream | 1129066 | 7744726 ~ 7747638 (-) | True | G78626 |
| TU94039 | other | upstream | 2049030 | 8664690 ~ 8665579 (-) | True | G79221 |
| TU94195 | other | upstream | 2155806 | 8771466 ~ 8772429 (-) | True | G79349 |
| TU94190 | other | upstream | 2242159 | 8857819 ~ 8859399 (-) | False | LOC117597331 |
