Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU92894 |
| length | 1126 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G78242 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 7276819 ~ 7292595 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92833 | lncRNA | downstream | 91087 | 7185433 ~ 7185732 (-) | True | G78203 |
| TU92799 | lncRNA | downstream | 169427 | 7077421 ~ 7107392 (-) | True | G78172 |
| TU92638 | lncRNA | downstream | 661159 | 6593141 ~ 6615660 (-) | True | G78058 |
| XR_004578288.1 | lncRNA | downstream | 740548 | 6533450 ~ 6536271 (-) | True | LOC117597449 |
| TU92383 | lncRNA | downstream | 948734 | 6326099 ~ 6328085 (-) | True | G77840 |
| TU92909 | lncRNA | upstream | 22102 | 7314697 ~ 7340303 (-) | True | G78255 |
| TU92914 | lncRNA | upstream | 49911 | 7342506 ~ 7343664 (-) | True | G78259 |
| TU92959 | lncRNA | upstream | 157247 | 7449842 ~ 7451460 (-) | False | LOC117597373 |
| TU92966 | lncRNA | upstream | 196742 | 7489337 ~ 7489718 (-) | True | G78303 |
| TU92968 | lncRNA | upstream | 198842 | 7491437 ~ 7491643 (-) | True | G78305 |
| XM_026928055.2 | mRNA | downstream | 29677 | 7235244 ~ 7247142 (-) | True | LOC113535006 |
| XM_026928056.2 | mRNA | downstream | 30723 | 7235244 ~ 7246096 (-) | False | LOC113535006 |
| XM_026928054.2 | mRNA | downstream | 46173 | 7226004 ~ 7230646 (-) | True | LOC113535005 |
| XM_026928138.2 | mRNA | downstream | 305719 | 6957846 ~ 6971100 (-) | True | si:ch73-116o1.2 |
| XM_034304594.1 | mRNA | downstream | 305719 | 6962146 ~ 6971100 (-) | False | si:ch73-116o1.2 |
| XM_034304509.1 | mRNA | upstream | 156453 | 7449048 ~ 7451561 (-) | True | LOC117597373 |
| XM_026947200.2 | mRNA | upstream | 253294 | 7545889 ~ 7549631 (-) | False | fzd5 |
| XM_026947199.2 | mRNA | upstream | 253294 | 7545889 ~ 7549631 (-) | True | fzd5 |
| XM_026947192.2 | mRNA | upstream | 264874 | 7557469 ~ 7594109 (-) | True | plekhm3 |
| XM_026947215.2 | mRNA | upstream | 308359 | 7600954 ~ 7614187 (-) | True | idh1 |
| TU92785 | other | downstream | 230010 | 7043787 ~ 7046809 (-) | True | G78159 |
| TU92652 | other | downstream | 711782 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92645 | other | downstream | 712248 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92666 | other | downstream | 730866 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
| XR_004578179.1 | other | downstream | 952139 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU93319 | other | upstream | 452131 | 7744726 ~ 7747638 (-) | True | G78626 |
| TU94039 | other | upstream | 1372095 | 8664690 ~ 8665579 (-) | True | G79221 |
| TU94195 | other | upstream | 1478871 | 8771466 ~ 8772429 (-) | True | G79349 |
| TU94190 | other | upstream | 1565224 | 8857819 ~ 8859399 (-) | False | LOC117597331 |
| TU94246 | other | upstream | 1704188 | 8996783 ~ 9019448 (-) | True | G79388 |
