Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU92968 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G78305 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 7491437 ~ 7491643 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92966 | lncRNA | downstream | 1719 | 7489337 ~ 7489718 (-) | True | G78303 |
| TU92959 | lncRNA | downstream | 39977 | 7449842 ~ 7451460 (-) | False | LOC117597373 |
| TU92914 | lncRNA | downstream | 147773 | 7342506 ~ 7343664 (-) | True | G78259 |
| TU92909 | lncRNA | downstream | 151134 | 7314697 ~ 7340303 (-) | True | G78255 |
| TU92894 | lncRNA | downstream | 198842 | 7276819 ~ 7292595 (-) | True | G78242 |
| TU93001 | lncRNA | upstream | 52863 | 7544506 ~ 7549562 (-) | False | fzd5 |
| TU93044 | lncRNA | upstream | 122760 | 7614403 ~ 7614613 (-) | True | G78364 |
| TU93320 | lncRNA | upstream | 256200 | 7747843 ~ 7748052 (-) | True | G78627 |
| TU93365 | lncRNA | upstream | 331645 | 7823288 ~ 7883288 (-) | True | G78653 |
| TU93464 | lncRNA | upstream | 491898 | 7983541 ~ 7983886 (-) | True | G78750 |
| XM_034304509.1 | mRNA | downstream | 39876 | 7449048 ~ 7451561 (-) | True | LOC117597373 |
| XM_026928055.2 | mRNA | downstream | 244295 | 7235244 ~ 7247142 (-) | True | LOC113535006 |
| XM_026928056.2 | mRNA | downstream | 245341 | 7235244 ~ 7246096 (-) | False | LOC113535006 |
| XM_026928054.2 | mRNA | downstream | 260791 | 7226004 ~ 7230646 (-) | True | LOC113535005 |
| XM_034304594.1 | mRNA | downstream | 520337 | 6962146 ~ 6971100 (-) | False | si:ch73-116o1.2 |
| XM_026947200.2 | mRNA | upstream | 54246 | 7545889 ~ 7549631 (-) | False | fzd5 |
| XM_026947199.2 | mRNA | upstream | 54246 | 7545889 ~ 7549631 (-) | True | fzd5 |
| XM_026947192.2 | mRNA | upstream | 65826 | 7557469 ~ 7594109 (-) | True | plekhm3 |
| XM_026947215.2 | mRNA | upstream | 109311 | 7600954 ~ 7614187 (-) | True | idh1 |
| XM_026947195.2 | mRNA | upstream | 257801 | 7749444 ~ 7766585 (-) | True | armc8 |
| TU92785 | other | downstream | 444628 | 7043787 ~ 7046809 (-) | True | G78159 |
| TU92652 | other | downstream | 926400 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92645 | other | downstream | 926866 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92666 | other | downstream | 945484 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
| XR_004578179.1 | other | downstream | 1166757 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU93319 | other | upstream | 253083 | 7744726 ~ 7747638 (-) | True | G78626 |
| TU94039 | other | upstream | 1173047 | 8664690 ~ 8665579 (-) | True | G79221 |
| TU94195 | other | upstream | 1279823 | 8771466 ~ 8772429 (-) | True | G79349 |
| TU94190 | other | upstream | 1366176 | 8857819 ~ 8859399 (-) | False | LOC117597331 |
| TU94246 | other | upstream | 1505140 | 8996783 ~ 9019448 (-) | True | G79388 |
