Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578155.1 |
| length | 364 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC117597312 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 6253870 ~ 6255150 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92312 | lncRNA | downstream | 6424 | 6239066 ~ 6247446 (-) | True | LOC117597406 |
| TU92315 | lncRNA | downstream | 6680 | 6238955 ~ 6247190 (-) | False | LOC117597406 |
| TU92313 | lncRNA | downstream | 6680 | 6239066 ~ 6247190 (-) | False | LOC117597406 |
| TU92287 | lncRNA | downstream | 51097 | 6202569 ~ 6202773 (-) | True | G77763 |
| TU92243 | lncRNA | downstream | 134732 | 6118931 ~ 6119138 (-) | True | G77719 |
| TU92332 | lncRNA | upstream | 25849 | 6280999 ~ 6281424 (-) | True | G77797 |
| TU92334 | lncRNA | upstream | 34647 | 6289797 ~ 6290011 (-) | True | G77799 |
| TU92381 | lncRNA | upstream | 67893 | 6323043 ~ 6324670 (-) | True | LOC117597343 |
| TU92383 | lncRNA | upstream | 70949 | 6326099 ~ 6328085 (-) | True | G77840 |
| XR_004578288.1 | lncRNA | upstream | 278300 | 6533450 ~ 6536271 (-) | True | LOC117597449 |
| XM_034304748.1 | mRNA | downstream | 524 | 6246828 ~ 6253346 (-) | False | LOC117597406 |
| XM_034304334.1 | mRNA | downstream | 10158 | 6225854 ~ 6243712 (-) | True | LOC113534858 |
| XM_034304335.1 | mRNA | downstream | 22678 | 6228208 ~ 6231192 (-) | True | LOC117597339 |
| XM_026928149.2 | mRNA | downstream | 771895 | 5440481 ~ 5481975 (-) | False | arhgap15 |
| XM_026928148.2 | mRNA | downstream | 771895 | 5440481 ~ 5481975 (-) | True | arhgap15 |
| XM_026928040.2 | mRNA | upstream | 153011 | 6408161 ~ 6431124 (-) | True | mcf2lb |
| XM_026928038.2 | mRNA | upstream | 153011 | 6408161 ~ 6430896 (-) | False | mcf2lb |
| XM_034304554.1 | mRNA | upstream | 153011 | 6408161 ~ 6426420 (-) | False | mcf2lb |
| XM_026928041.2 | mRNA | upstream | 153011 | 6408161 ~ 6426419 (-) | False | mcf2lb |
| XM_026928037.2 | mRNA | upstream | 153011 | 6408161 ~ 6426419 (-) | False | mcf2lb |
| TU92001 | other | downstream | 914237 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| TU91765 | other | downstream | 1408991 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU90967 | other | downstream | 2437834 | 3813479 ~ 3816036 (-) | False | faima |
| trnas-cga | other | downstream | 3314468 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| XR_004578242.1 | other | downstream | 3448007 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578179.1 | other | upstream | 68003 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92645 | other | upstream | 273896 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92652 | other | upstream | 273896 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92666 | other | upstream | 288968 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
| TU92785 | other | upstream | 788637 | 7043787 ~ 7046809 (-) | True | G78159 |
