Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU124618 |
| length | 739 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G105379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 26320032 ~ 26320770 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU124447 | lncRNA | downstream | 232337 | 26087480 ~ 26087695 (-) | True | G105219 |
| TU124309 | lncRNA | downstream | 483994 | 25833279 ~ 25836038 (-) | True | G105092 |
| TU123932 | lncRNA | downstream | 1074788 | 25243472 ~ 25245244 (-) | True | G104750 |
| TU123936 | lncRNA | downstream | 1076015 | 25243472 ~ 25244017 (-) | False | G104750 |
| TU123929 | lncRNA | downstream | 1078262 | 25239110 ~ 25241770 (-) | True | G104747 |
| TU124743 | lncRNA | upstream | 261524 | 26582294 ~ 26608329 (-) | False | LOC113526510 |
| XR_004578318.1 | lncRNA | upstream | 276664 | 26597434 ~ 26608339 (-) | False | LOC113526510 |
| XR_004578319.1 | lncRNA | upstream | 277246 | 26598016 ~ 26608327 (-) | False | LOC113526510 |
| XR_004578317.1 | lncRNA | upstream | 277247 | 26598017 ~ 26608327 (-) | True | LOC113526510 |
| TU124742 | lncRNA | upstream | 278763 | 26599533 ~ 26608329 (-) | False | LOC113526510 |
| XM_026914215.2 | mRNA | downstream | 27425 | 26194050 ~ 26292607 (-) | False | cd276 |
| XM_026914216.2 | mRNA | downstream | 27425 | 26206949 ~ 26292607 (-) | True | cd276 |
| XM_026913764.2 | mRNA | downstream | 414692 | 25890299 ~ 25905340 (-) | True | loxl1 |
| XM_034305190.1 | mRNA | downstream | 449761 | 25839470 ~ 25870271 (-) | True | LOC113526366 |
| XM_026913264.2 | mRNA | downstream | 771104 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XM_026913597.2 | mRNA | upstream | 3611 | 26324381 ~ 26464945 (-) | False | zgc:158464 |
| XM_026913596.2 | mRNA | upstream | 3611 | 26324381 ~ 26464944 (-) | True | zgc:158464 |
| XM_026913600.2 | mRNA | upstream | 3611 | 26324381 ~ 26464943 (-) | False | zgc:158464 |
| XM_026913601.2 | mRNA | upstream | 3611 | 26324381 ~ 26464938 (-) | False | zgc:158464 |
| XM_026913357.2 | mRNA | upstream | 194751 | 26515521 ~ 26532135 (-) | True | ube2q1 |
| TU124615 | other | downstream | 79027 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402763.2 | other | downstream | 771104 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XR_003402762.2 | other | downstream | 771104 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| XR_003402764.2 | other | downstream | 834911 | 25385325 ~ 25485121 (-) | False | si:cabz01090165.1 |
| XR_003402792.2 | other | downstream | 1557251 | 24752612 ~ 24762781 (-) | False | clasrp |
| TU124747 | other | upstream | 248315 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU125182 | other | upstream | 831542 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU126682 | other | upstream | 3381382 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 4022761 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 4409188 | 30729958 ~ 30732031 (-) | False | bbs10 |
