Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU154089 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G130492 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 10862404 ~ 10862638 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU154050 | lncRNA | upstream | 99535 | 10753800 ~ 10762869 (+) | True | G130459 |
| TU153994 | lncRNA | upstream | 121000 | 10739685 ~ 10741404 (+) | False | abl2 |
| TU154035 | lncRNA | upstream | 166384 | 10695834 ~ 10696020 (+) | False | tmem51a |
| TU154034 | lncRNA | upstream | 168990 | 10683129 ~ 10693414 (+) | False | tmem51a |
| TU153999 | lncRNA | upstream | 313337 | 10546979 ~ 10549067 (+) | True | G130412 |
| TU154224 | lncRNA | downstream | 45716 | 10908354 ~ 10908717 (+) | True | G130608 |
| TU154225 | lncRNA | downstream | 47255 | 10909893 ~ 10910207 (+) | True | G130609 |
| TU154227 | lncRNA | downstream | 48526 | 10911164 ~ 10911375 (+) | True | G130611 |
| TU154234 | lncRNA | downstream | 53699 | 10916337 ~ 10916625 (+) | True | G130618 |
| XR_003402857.2 | lncRNA | downstream | 82019 | 10944657 ~ 10948346 (+) | True | LOC113527270 |
| XM_026918321.2 | mRNA | upstream | 71490 | 10743725 ~ 10790914 (+) | True | fnbp1l |
| XM_026918328.2 | mRNA | upstream | 71490 | 10743725 ~ 10790914 (+) | False | fnbp1l |
| XM_026918011.2 | mRNA | upstream | 120979 | 10706719 ~ 10741425 (+) | True | abl2 |
| XM_034306634.1 | mRNA | upstream | 120979 | 10717317 ~ 10741425 (+) | False | abl2 |
| XM_026918024.2 | mRNA | upstream | 120979 | 10729070 ~ 10741425 (+) | False | abl2 |
| XM_034306370.1 | mRNA | downstream | 7481 | 10870119 ~ 10874126 (+) | False | mrpl55 |
| XM_026922991.2 | mRNA | downstream | 7485 | 10870123 ~ 10874126 (+) | False | mrpl55 |
| XM_026923001.2 | mRNA | downstream | 7523 | 10870161 ~ 10874126 (+) | True | mrpl55 |
| XM_026927752.2 | mRNA | downstream | 12772 | 10875410 ~ 10883004 (+) | True | slc5a9 |
| XM_026928700.2 | mRNA | downstream | 20897 | 10883535 ~ 10894051 (+) | True | gclm |
| TU153993 | other | upstream | 298843 | 10556518 ~ 10563561 (+) | True | zmynd12 |
| TU153960 | other | upstream | 504089 | 10357946 ~ 10358315 (+) | True | G130390 |
| TU152708 | other | upstream | 2549748 | 8307164 ~ 8312656 (+) | True | G129247 |
| TU152202 | other | upstream | 2890655 | 7968235 ~ 7971749 (+) | True | LOC113526371 |
| TU151932 | other | upstream | 3431407 | 7424023 ~ 7430997 (+) | True | mrps36 |
| TU154218 | other | downstream | 7496 | 10870134 ~ 10874017 (+) | False | mrpl55 |
| XR_003403321.2 | other | downstream | 759664 | 11622302 ~ 11633844 (+) | False | LOC113530800 |
| XR_003403311.2 | other | downstream | 759672 | 11622310 ~ 11633844 (+) | True | LOC113530800 |
| XR_003403352.2 | other | downstream | 759672 | 11622310 ~ 11633844 (+) | False | LOC113530800 |
| XR_003403367.2 | other | downstream | 759672 | 11622310 ~ 11633844 (+) | False | LOC113530800 |
