Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU210491 |
| length | 766 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G177807 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 7926293 ~ 7927058 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU210390 | lncRNA | downstream | 171275 | 7707511 ~ 7755018 (-) | True | G177729 |
| TU210396 | lncRNA | downstream | 175487 | 7728913 ~ 7750806 (-) | True | G177733 |
| TU210367 | lncRNA | downstream | 249623 | 7675916 ~ 7676670 (-) | False | igf1rb |
| TU210347 | lncRNA | downstream | 374543 | 7551522 ~ 7551750 (-) | True | G177691 |
| TU210337 | lncRNA | downstream | 417105 | 7508851 ~ 7509188 (-) | True | G177682 |
| XR_003403692.2 | lncRNA | upstream | 344049 | 8271107 ~ 8275360 (-) | True | LOC113536653 |
| TU210754 | lncRNA | upstream | 396561 | 8323619 ~ 8324164 (-) | True | G178057 |
| TU210939 | lncRNA | upstream | 594743 | 8521801 ~ 8522085 (-) | True | G178208 |
| TU210961 | lncRNA | upstream | 666128 | 8593186 ~ 8593405 (-) | True | G178227 |
| TU211159 | lncRNA | upstream | 784119 | 8711177 ~ 8712118 (-) | True | G178398 |
| XM_034308973.1 | mRNA | downstream | 81266 | 7818236 ~ 7845027 (-) | False | sv2ba |
| XM_034308972.1 | mRNA | downstream | 81267 | 7818236 ~ 7845026 (-) | True | sv2ba |
| XM_026930641.2 | mRNA | downstream | 88885 | 7818236 ~ 7837408 (-) | False | sv2ba |
| XM_026930903.2 | mRNA | downstream | 115614 | 7809390 ~ 7810679 (-) | True | mespba |
| XM_026930905.2 | mRNA | downstream | 124741 | 7799665 ~ 7801552 (-) | True | mespaa |
| XM_026930256.2 | mRNA | upstream | 64946 | 7992004 ~ 8124785 (-) | True | ntrk3b |
| XM_034308426.1 | mRNA | upstream | 64946 | 7992004 ~ 8124183 (-) | False | ntrk3b |
| XM_026930844.2 | mRNA | upstream | 246203 | 8173261 ~ 8180651 (-) | True | mrpl46 |
| XM_026930771.2 | mRNA | upstream | 380221 | 8307279 ~ 8312494 (-) | False | LOC113536672 |
| XM_026930770.2 | mRNA | upstream | 380221 | 8307279 ~ 8312494 (-) | True | LOC113536672 |
| XR_004579066.1 | other | downstream | 337478 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579065.1 | other | downstream | 337478 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579064.1 | other | downstream | 337478 | 7580434 ~ 7588815 (-) | False | si:ch1073-365p7.2 |
| XR_004579063.1 | other | downstream | 337478 | 7580434 ~ 7588815 (-) | True | si:ch1073-365p7.2 |
| TU210154 | other | downstream | 442335 | 7481449 ~ 7483958 (-) | False | si:dkey-56d12.4 |
| trnar-acg_4 | other | upstream | 315048 | 8242106 ~ 8242178 (-) | True | trnar-acg_4 |
| trnar-acg_5 | other | upstream | 315673 | 8242731 ~ 8242803 (-) | True | trnar-acg_5 |
| trnar-ucg_7 | other | upstream | 317591 | 8244649 ~ 8244721 (-) | True | trnar-ucg_7 |
| trnar-acg_7 | other | upstream | 319645 | 8246703 ~ 8246775 (-) | True | trnar-acg_7 |
| trnar-acg_8 | other | upstream | 320632 | 8247690 ~ 8247762 (-) | True | trnar-acg_8 |
