Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32201 |
| length | 203 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G27303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 14492637 ~ 14492839 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32157 | lncRNA | downstream | 38346 | 14444626 ~ 14454291 (-) | True | G27259 |
| TU32152 | lncRNA | downstream | 91208 | 14354841 ~ 14401429 (-) | True | G27254 |
| XR_004577242.1 | lncRNA | downstream | 241373 | 14238795 ~ 14251264 (-) | True | LOC117596067 |
| TU32061 | lncRNA | downstream | 319716 | 14172672 ~ 14172921 (-) | True | G27169 |
| TU32060 | lncRNA | downstream | 334538 | 14156938 ~ 14158099 (-) | True | G27168 |
| TU32377 | lncRNA | upstream | 297592 | 14790431 ~ 14790641 (-) | True | G27448 |
| TU32421 | lncRNA | upstream | 367166 | 14860005 ~ 14860246 (-) | True | G27484 |
| TU32441 | lncRNA | upstream | 391416 | 14884255 ~ 14884487 (-) | True | G27502 |
| TU32551 | lncRNA | upstream | 517486 | 15010325 ~ 15010661 (-) | True | G27600 |
| TU32615 | lncRNA | upstream | 572046 | 15064885 ~ 15065211 (-) | True | G27652 |
| XM_026909744.2 | mRNA | downstream | 35405 | 14278049 ~ 14457232 (-) | False | plxna1b |
| XM_034311693.1 | mRNA | downstream | 35991 | 14278049 ~ 14456646 (-) | True | plxna1b |
| XM_034311697.1 | mRNA | downstream | 49552 | 14278049 ~ 14443085 (-) | False | plxna1b |
| XM_026918449.2 | mRNA | downstream | 320581 | 14158384 ~ 14172056 (-) | True | txnrd3 |
| XM_034309688.1 | mRNA | downstream | 344788 | 14129841 ~ 14147849 (-) | False | LOC113531636 |
| XM_026922331.2 | mRNA | upstream | 3381 | 14496220 ~ 14541322 (-) | False | chchd6b |
| XM_026922322.2 | mRNA | upstream | 3381 | 14496220 ~ 14541322 (-) | True | chchd6b |
| XM_026922339.2 | mRNA | upstream | 3381 | 14496220 ~ 14541321 (-) | False | chchd6b |
| XM_026928987.2 | mRNA | upstream | 52350 | 14545189 ~ 14554473 (-) | True | tpra1 |
| XM_026912700.2 | mRNA | upstream | 64723 | 14557562 ~ 14560676 (-) | True | trim107 |
| trnae-cuc_5 | other | downstream | 100286 | 14392280 ~ 14392351 (-) | True | trnae-cuc_5 |
| TU31994 | other | downstream | 434192 | 14050401 ~ 14058445 (-) | True | G27107 |
| XR_004579719.1 | other | downstream | 585448 | 13873714 ~ 13907189 (-) | False | lhfpl4a |
| TU31814 | other | downstream | 857985 | 13632262 ~ 13634652 (-) | False | rps26l |
| TU31648 | other | downstream | 992653 | 13498605 ~ 13499984 (-) | False | slc5a8l |
| XR_003403256.2 | other | upstream | 380109 | 14872948 ~ 14875990 (-) | False | pxmp4 |
| XR_003403257.2 | other | upstream | 380110 | 14872949 ~ 14875990 (-) | False | pxmp4 |
| TU32819 | other | upstream | 804470 | 15297309 ~ 15299019 (-) | True | G27843 |
| TU32916 | other | upstream | 963796 | 15456635 ~ 15461001 (-) | True | G27925 |
| TU32920 | other | upstream | 969111 | 15461950 ~ 15469229 (-) | False | oxtr |
