Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU306502 |
| length | 318 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G258883 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21750011 ~ 21752454 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403132.2 | lncRNA | upstream | 147543 | 21600622 ~ 21602468 (+) | True | LOC113530300 |
| TU306346 | lncRNA | upstream | 193573 | 21551918 ~ 21556438 (+) | False | G258753 |
| TU306351 | lncRNA | upstream | 239017 | 21499978 ~ 21510994 (+) | True | G258758 |
| TU306345 | lncRNA | upstream | 253446 | 21479232 ~ 21496565 (+) | True | G258753 |
| TU306276 | lncRNA | upstream | 363910 | 21384291 ~ 21386101 (+) | True | G258689 |
| XR_004579749.1 | lncRNA | downstream | 217924 | 21970378 ~ 21982618 (+) | True | LOC117599289 |
| TU306718 | lncRNA | downstream | 253876 | 22006330 ~ 22006530 (+) | True | G259086 |
| TU306719 | lncRNA | downstream | 254254 | 22006708 ~ 22007039 (+) | True | G259087 |
| TU306725 | lncRNA | downstream | 263657 | 22016111 ~ 22022398 (+) | True | G259093 |
| TU306726 | lncRNA | downstream | 263963 | 22016417 ~ 22022472 (+) | False | G259093 |
| XM_026920838.2 | mRNA | upstream | 1608 | 21674337 ~ 21748403 (+) | True | LOC113530651 |
| XM_026920839.2 | mRNA | upstream | 4585 | 21674337 ~ 21745426 (+) | False | LOC113530651 |
| XM_034311973.1 | mRNA | upstream | 4585 | 21675084 ~ 21745426 (+) | False | LOC113530651 |
| XM_026920840.2 | mRNA | upstream | 4841 | 21674337 ~ 21745170 (+) | False | LOC113530651 |
| XM_026920094.2 | mRNA | upstream | 123266 | 21611803 ~ 21626745 (+) | False | zmp:0000001174 |
| XM_026921380.2 | mRNA | downstream | 2393 | 21754847 ~ 21788913 (+) | False | LOC113530955 |
| XM_034311685.1 | mRNA | downstream | 2395 | 21754849 ~ 21782659 (+) | False | LOC113530955 |
| XM_026921383.2 | mRNA | downstream | 2396 | 21754850 ~ 21795371 (+) | True | LOC113530955 |
| XM_026921381.2 | mRNA | downstream | 2396 | 21754850 ~ 21795371 (+) | False | LOC113530955 |
| XM_026921384.2 | mRNA | downstream | 2396 | 21754850 ~ 21785161 (+) | False | LOC113530955 |
| TU306357 | other | upstream | 207757 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| TU306101 | other | upstream | 519140 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
| XR_004579743.1 | other | upstream | 842761 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | upstream | 844938 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| XR_003403172.2 | other | upstream | 1235816 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| trnal-uaa_2 | other | downstream | 559352 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
| XR_004579671.1 | other | downstream | 919171 | 22671625 ~ 22679550 (+) | False | LOC113530514 |
| TU307769 | other | downstream | 1619293 | 23371747 ~ 23383653 (+) | True | LOC117599309 |
| TU307771 | other | downstream | 1619293 | 23371747 ~ 23383653 (+) | False | LOC117599309 |
| TU307780 | other | downstream | 1635084 | 23387538 ~ 23389314 (+) | True | G259993 |
