Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU381842 |
| length | 377 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 3 |
| gene id | pex5lb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 18394023 ~ 18430022 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU381819 | lncRNA | upstream | 41934 | 18370727 ~ 18373883 (+) | True | G322429 |
| TU381788 | lncRNA | upstream | 72327 | 18338329 ~ 18343490 (+) | True | G322405 |
| TU381790 | lncRNA | upstream | 72327 | 18338329 ~ 18343490 (+) | False | G322405 |
| TU381778 | lncRNA | upstream | 184354 | 18229395 ~ 18231463 (+) | True | G322398 |
| TU381739 | lncRNA | upstream | 216108 | 18198840 ~ 18199709 (+) | True | G322365 |
| TU381841 | lncRNA | downstream | 9695 | 18432326 ~ 18432702 (+) | True | G322446 |
| TU381857 | lncRNA | downstream | 16536 | 18439167 ~ 18439866 (+) | True | G322462 |
| TU382137 | lncRNA | downstream | 292764 | 18715395 ~ 18720439 (+) | True | G322696 |
| TU382184 | lncRNA | downstream | 342561 | 18765192 ~ 18765602 (+) | True | G322738 |
| TU382190 | lncRNA | downstream | 388474 | 18811105 ~ 18811652 (+) | False | G322744 |
| XM_026946318.2 | mRNA | upstream | 188677 | 18225921 ~ 18227140 (+) | True | si:ch211-162e15.3 |
| XM_026946304.2 | mRNA | upstream | 421139 | 17990725 ~ 17994678 (+) | True | bambib |
| XM_026946277.2 | mRNA | upstream | 436695 | 17965893 ~ 17979122 (+) | True | wacb |
| XM_026946278.2 | mRNA | upstream | 436695 | 17966188 ~ 17979122 (+) | False | wacb |
| XM_026946276.2 | mRNA | upstream | 436695 | 17966192 ~ 17979122 (+) | False | wacb |
| XM_026946296.2 | mRNA | downstream | 12718 | 18435349 ~ 18446743 (+) | False | gnb4a |
| XM_026946297.2 | mRNA | downstream | 12719 | 18435350 ~ 18449078 (+) | True | gnb4a |
| XM_026946302.2 | mRNA | downstream | 31505 | 18454136 ~ 18477637 (+) | False | si:ch1073-184j22.1 |
| XM_026946301.2 | mRNA | downstream | 41184 | 18463815 ~ 18477637 (+) | True | si:ch1073-184j22.1 |
| XM_026946310.2 | mRNA | downstream | 65996 | 18488627 ~ 18489656 (+) | True | sft2d3 |
| TU381774 | other | upstream | 188584 | 18226562 ~ 18227233 (+) | False | si:ch211-162e15.3 |
| TU381775 | other | upstream | 188681 | 18226562 ~ 18227136 (+) | False | si:ch211-162e15.3 |
| XR_003404718.2 | other | upstream | 784209 | 17570649 ~ 17631608 (+) | False | egfra |
| XR_004580277.1 | other | upstream | 932140 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_004580278.1 | other | upstream | 932140 | 17478834 ~ 17483677 (+) | False | fuz |
| XR_004580282.1 | other | downstream | 393378 | 18816009 ~ 18871360 (+) | True | slc44a5a |
| TU383181 | other | downstream | 2016071 | 20438702 ~ 20440561 (+) | True | G323534 |
| XR_004580310.1 | other | downstream | 2214953 | 20637584 ~ 20659411 (+) | False | arhgef4 |
| trnap-ugg_22 | other | downstream | 2492773 | 20915404 ~ 20915475 (+) | True | trnap-ugg_22 |
| TU383298 | other | downstream | 2598558 | 21021189 ~ 21136847 (+) | True | G323615 |
