Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU425010 |
| length | 342 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G358726 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 1715546 ~ 1715887 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU425001 | lncRNA | upstream | 107635 | 1607639 ~ 1607911 (+) | True | G358720 |
| TU424994 | lncRNA | upstream | 265081 | 1450155 ~ 1450465 (+) | True | G358713 |
| TU424861 | lncRNA | upstream | 475408 | 1239914 ~ 1240138 (+) | True | G358587 |
| TU424851 | lncRNA | upstream | 575188 | 1140007 ~ 1140358 (+) | True | G358577 |
| TU424781 | lncRNA | upstream | 743200 | 971580 ~ 972346 (+) | True | G358519 |
| TU425086 | lncRNA | downstream | 209921 | 1925808 ~ 1928313 (+) | True | G358796 |
| TU425132 | lncRNA | downstream | 264333 | 1980220 ~ 1980594 (+) | True | G358828 |
| TU425144 | lncRNA | downstream | 281316 | 1997203 ~ 2003714 (+) | True | G358834 |
| TU425171 | lncRNA | downstream | 477276 | 2193163 ~ 2193423 (+) | True | G358858 |
| TU425109 | lncRNA | downstream | 605237 | 2321124 ~ 2386730 (+) | False | c25h16orf87 |
| XM_026937736.2 | mRNA | upstream | 282228 | 1303881 ~ 1433318 (+) | True | cdh8 |
| XM_026937737.2 | mRNA | upstream | 282228 | 1303881 ~ 1433318 (+) | False | cdh8 |
| XM_034299423.1 | mRNA | upstream | 282228 | 1389832 ~ 1433318 (+) | False | cdh8 |
| XM_026937569.2 | mRNA | upstream | 720315 | 953205 ~ 995231 (+) | True | cdh11 |
| XM_026937707.2 | mRNA | upstream | 1238574 | 466649 ~ 476972 (+) | False | tk2 |
| XM_034299457.1 | mRNA | downstream | 304833 | 2020720 ~ 2174969 (+) | True | itfg1 |
| XM_026937401.2 | mRNA | downstream | 462091 | 2177978 ~ 2203598 (+) | True | LOC113540805 |
| XM_026937615.2 | mRNA | downstream | 571183 | 2287070 ~ 2298515 (+) | True | dnaja2a |
| XM_026937439.2 | mRNA | downstream | 605245 | 2321132 ~ 2338762 (+) | True | c25h16orf87 |
| XM_026937382.2 | mRNA | downstream | 631934 | 2347821 ~ 2384488 (+) | False | mylk3 |
| TU424567 | other | upstream | 1276660 | 426896 ~ 438886 (+) | False | cmtm4 |
| TU424577 | other | upstream | 1363777 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424578 | other | upstream | 1363777 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424579 | other | upstream | 1363777 | 348769 ~ 351769 (+) | False | ccne1 |
| TU424532 | other | upstream | 1366870 | 344118 ~ 348676 (+) | False | ccne1 |
| XR_004577234.1 | other | downstream | 174687 | 1890574 ~ 1904591 (+) | True | LOC117596061 |
| TU425115 | other | downstream | 605284 | 2321171 ~ 2338758 (+) | False | c25h16orf87 |
| TU425321 | other | downstream | 920402 | 2636289 ~ 2664941 (+) | False | igdcc4 |
| TU426380 | other | downstream | 2007139 | 3723026 ~ 3729877 (+) | False | cylda |
| TU426382 | other | downstream | 2025899 | 3741786 ~ 3745457 (+) | False | cylda |
