Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000388 |
| length | 843 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 5 |
| gene id | AMCG00000388 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 13667889 ~ 13679929 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04727 | GABAergic synapse |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188855 | lncRNA | upstream | 17838 | 13649403 ~ 13650051 (+) | True | G150066 |
| TU188827 | lncRNA | upstream | 254825 | 13412865 ~ 13413064 (+) | True | G150042 |
| TU188779 | lncRNA | upstream | 699747 | 12966975 ~ 12968142 (+) | False | AMCG00000381 |
| TU188614 | lncRNA | upstream | 826216 | 12833539 ~ 12841673 (+) | True | G149869 |
| TU188432 | lncRNA | upstream | 1569517 | 12092387 ~ 12098372 (+) | True | G149747 |
| TU188905 | lncRNA | downstream | 59847 | 13739776 ~ 13746116 (+) | True | G150106 |
| TU189157 | lncRNA | downstream | 784963 | 14464892 ~ 14465302 (+) | True | G150303 |
| TU189234 | lncRNA | downstream | 1053303 | 14733232 ~ 14733440 (+) | True | G150364 |
| TU189295 | lncRNA | downstream | 1251849 | 14931778 ~ 14939473 (+) | True | AMCG00000443 |
| TU189297 | lncRNA | downstream | 1251849 | 14931778 ~ 14944400 (+) | False | AMCG00000443 |
| AMCG00000387 | mRNA | upstream | 41133 | 13618488 ~ 13626756 (+) | True | AMCG00000387 |
| AMCG00000386 | mRNA | upstream | 50264 | 13608753 ~ 13617625 (+) | True | AMCG00000386 |
| AMCG00000385 | mRNA | upstream | 258030 | 13352332 ~ 13409859 (+) | True | AMCG00000385 |
| AMCG00000384 | mRNA | upstream | 329867 | 13327392 ~ 13338022 (+) | True | AMCG00000384 |
| AMCG00000381 | mRNA | upstream | 637036 | 12966877 ~ 13030853 (+) | True | AMCG00000381 |
| AMCG00000395 | mRNA | downstream | 8038 | 13687967 ~ 13690398 (+) | True | AMCG00000395 |
| AMCG00000394 | mRNA | downstream | 51584 | 13731513 ~ 13739622 (+) | True | AMCG00000394 |
| AMCG00000396 | mRNA | downstream | 74879 | 13754808 ~ 13759231 (+) | True | AMCG00000396 |
| AMCG00000401 | mRNA | downstream | 79378 | 13759307 ~ 13759834 (+) | True | AMCG00000401 |
| AMCG00000404 | mRNA | downstream | 113329 | 13793258 ~ 13805747 (+) | True | AMCG00000404 |
| TU188603 | other | upstream | 939986 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188404 | other | upstream | 1682174 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188165 | other | upstream | 3132752 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188032 | other | upstream | 3697088 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU187550 | other | upstream | 5086777 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU188861 | other | downstream | 10910 | 13690839 ~ 13692589 (+) | True | G150069 |
| TU189044 | other | downstream | 453209 | 14133138 ~ 14153840 (+) | True | AMCG00000412 |
| TU189714 | other | downstream | 3256064 | 16935993 ~ 16938282 (+) | True | G150750 |
| TU189794 | other | downstream | 3865525 | 17545454 ~ 17548508 (+) | True | G150811 |
| TU190029 | other | downstream | 4473935 | 18153864 ~ 18159321 (+) | True | G150976 |
