Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU188079 |
| length | 921 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G149454 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10029694 ~ 10030786 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188070 | lncRNA | upstream | 7841 | 10021422 ~ 10021853 (+) | True | G149450 |
| TU188017 | lncRNA | upstream | 54522 | 9973048 ~ 9975172 (+) | True | G149415 |
| TU188022 | lncRNA | upstream | 67123 | 9957713 ~ 9962571 (+) | True | G149416 |
| TU187938 | lncRNA | upstream | 252706 | 9719947 ~ 9776988 (+) | True | G149359 |
| TU187924 | lncRNA | upstream | 456130 | 9561557 ~ 9573564 (+) | False | AMCG00000281 |
| TU188081 | lncRNA | downstream | 3788 | 10034574 ~ 10035072 (+) | True | G149455 |
| TU188090 | lncRNA | downstream | 17610 | 10048396 ~ 10048621 (+) | True | G149464 |
| TU188091 | lncRNA | downstream | 18479 | 10049265 ~ 10049532 (+) | True | G149465 |
| TU188092 | lncRNA | downstream | 20390 | 10051176 ~ 10051753 (+) | True | G149466 |
| TU188115 | lncRNA | downstream | 60097 | 10090883 ~ 10091107 (+) | True | G149486 |
| AMCG00000306 | mRNA | upstream | 19583 | 10002721 ~ 10010111 (+) | True | AMCG00000306 |
| AMCG00000292 | mRNA | upstream | 109612 | 9911136 ~ 9920082 (+) | True | AMCG00000292 |
| AMCG00000294 | mRNA | upstream | 152750 | 9864987 ~ 9876944 (+) | True | AMCG00000294 |
| AMCG00000293 | mRNA | upstream | 189265 | 9828089 ~ 9840429 (+) | True | AMCG00000293 |
| AMCG00000282 | mRNA | upstream | 282686 | 9721890 ~ 9747008 (+) | True | AMCG00000282 |
| AMCG00000307 | mRNA | downstream | 33025 | 10063811 ~ 10072297 (+) | True | AMCG00000307 |
| AMCG00000297 | mRNA | downstream | 62207 | 10092993 ~ 10100250 (+) | True | AMCG00000297 |
| AMCG00000305 | mRNA | downstream | 518044 | 10548830 ~ 10549199 (+) | True | AMCG00000305 |
| AMCG00000304 | mRNA | downstream | 519146 | 10549932 ~ 10550914 (+) | True | AMCG00000304 |
| AMCG00000314 | mRNA | downstream | 1097072 | 11127858 ~ 11131679 (+) | True | AMCG00000314 |
| TU188032 | other | upstream | 58893 | 9969324 ~ 9970801 (+) | True | G149424 |
| TU187550 | other | upstream | 1448582 | 8579717 ~ 8581112 (+) | False | AMCG00000249 |
| TU187300 | other | upstream | 2666987 | 7359278 ~ 7362707 (+) | False | AMCG00000217 |
| TU187301 | other | upstream | 2666987 | 7361020 ~ 7362707 (+) | True | AMCG00000217 |
| TU187271 | other | upstream | 2733030 | 7290666 ~ 7296664 (+) | False | AMCG00000216 |
| TU188165 | other | downstream | 503804 | 10534590 ~ 10535137 (+) | True | G149525 |
| TU188404 | other | downstream | 1951674 | 11982460 ~ 11985715 (+) | False | AMCG00000352 |
| TU188603 | other | downstream | 2648884 | 12679670 ~ 12727903 (+) | True | G149859 |
| TU188861 | other | downstream | 3660053 | 13690839 ~ 13692589 (+) | True | G150069 |
| TU189044 | other | downstream | 4102352 | 14133138 ~ 14153840 (+) | True | AMCG00000412 |
