RNA id: TU10340



Basic Information


Item Value
RNA id TU10340
length 403
RNA type TUCP
GC content 0.49
exon number 2
gene id G8377
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50151264 ~ 50157719 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCGGTGCCCTGCCTGCGTCTCTGCAggcgtgtgtgtgggtgtgccgGTGTGCGGCCATGGTGCGGCCTGCATGCACGTGTCAAGCTCACCTGCCGGGCTTGTGGATGAACTTCTGGAGTCGGGCTTTAACCTCGTCGTAAGTCAGGAAGGCCATGTACCCGGGGTGTGTGACTGCCAGGCTGTTCCAGTTCCGCAGCAACGACGACCACGGCTGCAGGAACGAGGGAGACACACAGCAGGGATGAAGGGAACGTACTTGTCACCGAAAGACTTCCTCCAGAACTCGGCCGCATCTGCCTTGGTGATCCTGAAGTTATCGCCCTGGAAAAGGCCGTTGGGAAAGATGGCCTTCAGCTCCGCCAGCATGTGGCTGAAGATCAGTGACAGCTTGGTCAGATTACgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU10339 lncRNA upstream 1722 50149325 ~ 50149542 (+) True G8376
TU10338 lncRNA upstream 2143 50148884 ~ 50149121 (+) True G8375
TU10337 lncRNA upstream 3069 50147876 ~ 50148195 (+) True G8374
TU10336 lncRNA upstream 5441 50145371 ~ 50145823 (+) True G8373
TU10335 lncRNA upstream 6274 50143305 ~ 50144990 (+) True G8372
TU10343 lncRNA downstream 13801 50171520 ~ 50171951 (+) True G8380
TU10383 lncRNA downstream 78958 50236677 ~ 50237721 (+) False AMCG00004463
TU10416 lncRNA downstream 126706 50284425 ~ 50288071 (+) True G8443
TU10499 lncRNA downstream 537505 50695224 ~ 50695567 (+) True G8509
TU10533 lncRNA downstream 601356 50759075 ~ 50759360 (+) True G8538
AMCG00004458 mRNA upstream 15430 50121429 ~ 50135834 (+) True AMCG00004458
AMCG00004455 mRNA upstream 118922 50004310 ~ 50032342 (+) True AMCG00004455
AMCG00004453 mRNA upstream 161600 49989275 ~ 49989664 (+) True AMCG00004453
AMCG00004448 mRNA upstream 163773 49984727 ~ 49987491 (+) True AMCG00004448
AMCG00004450 mRNA upstream 168106 49968474 ~ 49983158 (+) True AMCG00004450
AMCG00004459 mRNA downstream 26983 50184702 ~ 50187493 (+) True AMCG00004459
AMCG00004462 mRNA downstream 41786 50199505 ~ 50212190 (+) True AMCG00004462
AMCG00004464 mRNA downstream 54498 50212217 ~ 50214554 (+) True AMCG00004464
AMCG00004463 mRNA downstream 79205 50236924 ~ 50243043 (+) True AMCG00004463
AMCG00004468 mRNA downstream 101112 50258831 ~ 50265447 (+) True AMCG00004468
TU9962 other upstream 1217169 48932450 ~ 48934095 (+) True G8099
TU9841 other upstream 2004108 48146888 ~ 48147156 (+) True G7999
TU9559 other upstream 4182958 45962010 ~ 45968306 (+) True AMCG00004380
TU9000 other upstream 7460155 42688779 ~ 42691109 (+) True G7329
TU8899 other upstream 7934902 42212510 ~ 42216362 (+) False AMCG00004304
TU10527 other downstream 586072 50743791 ~ 50753349 (+) False AMCG00004477
TU10626 other downstream 957222 51114941 ~ 51115262 (+) True G8606
TU10780 other downstream 1781842 51939561 ~ 51946818 (+) True AMCG00004501
TU10796 other downstream 1831634 51989353 ~ 52013630 (+) True AMCG00004509
TU11143 other downstream 3025675 53183394 ~ 53183983 (+) True G9012

Expression Profile