Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU6969 |
| length | 206 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G5681 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 33474842 ~ 33475047 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6968 | lncRNA | upstream | 1512 | 33473036 ~ 33473330 (+) | True | G5680 |
| TU6947 | lncRNA | upstream | 29422 | 33438328 ~ 33445420 (+) | True | G5662 |
| TU6819 | lncRNA | upstream | 862791 | 32611833 ~ 32612051 (+) | True | G5569 |
| TU6774 | lncRNA | upstream | 1072459 | 32400405 ~ 32402383 (+) | True | AMCG00004079 |
| TU6773 | lncRNA | upstream | 1087307 | 32384435 ~ 32387535 (+) | True | G5529 |
| TU6976 | lncRNA | downstream | 91126 | 33566173 ~ 33567479 (+) | True | G5688 |
| TU6999 | lncRNA | downstream | 122845 | 33597892 ~ 33600011 (+) | True | G5707 |
| TU7014 | lncRNA | downstream | 151320 | 33626367 ~ 33627507 (+) | True | G5720 |
| TU7032 | lncRNA | downstream | 210680 | 33685727 ~ 33768814 (+) | True | G5731 |
| TU7059 | lncRNA | downstream | 294542 | 33769589 ~ 33771848 (+) | True | G5750 |
| AMCG00004108 | mRNA | upstream | 22170 | 33435750 ~ 33452672 (+) | True | AMCG00004108 |
| AMCG00004100 | mRNA | upstream | 227278 | 33241032 ~ 33247564 (+) | True | AMCG00004100 |
| AMCG00004101 | mRNA | upstream | 332304 | 33137636 ~ 33142538 (+) | True | AMCG00004101 |
| AMCG00004099 | mRNA | upstream | 339351 | 33132355 ~ 33135491 (+) | True | AMCG00004099 |
| AMCG00004092 | mRNA | upstream | 527926 | 32937405 ~ 32946916 (+) | True | AMCG00004092 |
| AMCG00004109 | mRNA | downstream | 85977 | 33561024 ~ 33565863 (+) | True | AMCG00004109 |
| AMCG00004110 | mRNA | downstream | 272862 | 33747909 ~ 33761457 (+) | True | AMCG00004110 |
| AMCG00004113 | mRNA | downstream | 291999 | 33767046 ~ 33767636 (+) | True | AMCG00004113 |
| AMCG00004115 | mRNA | downstream | 430244 | 33905291 ~ 33912885 (+) | True | AMCG00004115 |
| AMCG00004121 | mRNA | downstream | 644524 | 34119571 ~ 34130023 (+) | True | AMCG00004121 |
| TU6919 | other | upstream | 343656 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU6554 | other | upstream | 2580015 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 3203318 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 5371631 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU7209 | other | downstream | 1377816 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 2277486 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 2797145 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 3298954 | 36774001 ~ 36774523 (+) | True | G6314 |
| TU7756 | other | downstream | 3386500 | 36861547 ~ 36891746 (+) | True | G6328 |
