RNA id: TU9326



Basic Information


Item Value
RNA id TU9326
length 231
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G7584
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44336451 ~ 44336681 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcagagtccttgatctcattccggcgcttactcaagacacatcatttcagacagtacttgtaatattagtcctctatccctgctagatagcacttcacagtttttattatgcttttcgcgttgttgttttcctccttgctccctttcccgtagcccttgactgtgaccctacatcttgacagcacttagctttcaccatccaggatgtaggaagtcacttactgtacttgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU9305 lncRNA upstream 248414 44083098 ~ 44088037 (+) True G7569
TU9307 lncRNA upstream 255096 44078345 ~ 44081355 (+) False G7569
TU9208 lncRNA upstream 741373 43591750 ~ 43595078 (+) True G7485
TU9148 lncRNA upstream 989492 43346350 ~ 43346959 (+) True G7441
TU9117 lncRNA upstream 1098798 43235818 ~ 43237653 (+) True G7418
TU9368 lncRNA downstream 193659 44530340 ~ 44543143 (+) True G7614
TU9402 lncRNA downstream 237650 44574331 ~ 44574997 (+) True G7638
TU9408 lncRNA downstream 251025 44587706 ~ 44587984 (+) True G7644
TU9429 lncRNA downstream 279635 44616316 ~ 44617399 (+) True G7662
TU9437 lncRNA downstream 299624 44636305 ~ 44640732 (+) False AMCG00004355
AMCG00004346 mRNA upstream 537976 43795221 ~ 43798475 (+) True AMCG00004346
AMCG00004343 mRNA upstream 614472 43671020 ~ 43721979 (+) True AMCG00004343
AMCG00004338 mRNA upstream 704555 43625615 ~ 43631896 (+) True AMCG00004338
AMCG00004342 mRNA upstream 725356 43610781 ~ 43611095 (+) True AMCG00004342
AMCG00004335 mRNA upstream 801793 43526980 ~ 43534658 (+) True AMCG00004335
AMCG00004351 mRNA downstream 73918 44410599 ~ 44411051 (+) True AMCG00004351
AMCG00004354 mRNA downstream 161747 44498428 ~ 44498907 (+) True AMCG00004354
AMCG00004353 mRNA downstream 175166 44511847 ~ 44512326 (+) True AMCG00004353
AMCG00004352 mRNA downstream 212751 44549432 ~ 44552133 (+) True AMCG00004352
AMCG00004355 mRNA downstream 281504 44618185 ~ 44640504 (+) True AMCG00004355
TU9000 other upstream 1645342 42688779 ~ 42691109 (+) True G7329
TU8899 other upstream 2120089 42212510 ~ 42216362 (+) False AMCG00004304
TU8679 other upstream 2829220 41459576 ~ 41507231 (+) True G7094
TU7800 other upstream 7336293 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 7444705 36861547 ~ 36891746 (+) True G6328
TU9559 other downstream 1625329 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 3810207 48146888 ~ 48147156 (+) True G7999
TU9962 other downstream 4595769 48932450 ~ 48934095 (+) True G8099
TU10340 other downstream 5814583 50151264 ~ 50157719 (+) True G8377
TU10527 other downstream 6407110 50743791 ~ 50753349 (+) False AMCG00004477

Expression Profile