RNA id: TU185051


Basic Information

Item Value
RNA id TU185051
length 762
RNA type TUCP
GC content 0.63
exon number 6
gene id AMCG00005365
representative False

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22132565 ~ 22145610 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCCAGCTCAGCCCGTCCGTGTTGTCAGCGGAAGCTCTTCGGCCCGACACGGCAGCGCGGCGCAGCTCGGATCACATCGGCCCGCTTCGTGTGAAAACCAGACCCTCGTCGAGATGGTTCTGCTGACGATGATCGCCCGGGTGGCGGACGGGCTGCCGCTGGCCGCCTCGATGCAGGAGGACGAGCAGGGAAGTGAAAAGtcgGGCCGGGACCTGCAGCAGTACCAGAGCCAGGCCAAGCAGCTGTTCCGCAAGCTGAACGAGCAGAGCCCCACGCGCTGCACACTGGAGGCAGGGGCCATGGCCTTCCACTATGTGATCGAGAGGGGTGTCTGCTACTTGGTGCTGTGTGAGGCCGGATTCCCCAAGAAGCTGGCCTTCGCCTACCTGGAGGACCTGCAGGCCGAGTTCGACGAGCAGCACGGCAAGAAGGTGCCCACCGTGTCCCGGCCGTACTCCTTCATCGAGTTCGACACCTACATCCAGAAGACGAAGAAGCTGTACATCGACAGCCGCGCGCGAAGGAACCTGGGCAGCATCAACACCGAGCTGCAGGACGTGCAGAGGATCATGGTGGCCAACATCGAGGAGGTGTTGCAGCGTGGAGAGGCGCTGTCAGctcTGGACTCGAAGGCCAGTAACCTGTCCAGTCTGTCCAAGAAGTACCGCAGCGACGCCAAGTACCTGAACACGCGCTCCACCTACGCCAAGCTGGCTGCCGGCGCCGTCTTCATCGTCATGCTCATCGTGTACGTGCGCTTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185037 lncRNA upstream 51843 22081644 ~ 22087344 (+) True G147066
TU184988 lncRNA upstream 182142 21956601 ~ 21957045 (+) True G147027
TU184985 lncRNA upstream 188600 21950328 ~ 21950587 (+) True G147024
TU184983 lncRNA upstream 190569 21948086 ~ 21948618 (+) True G147022
TU184849 lncRNA upstream 393736 21744879 ~ 21745451 (+) True G146928
AMCG00005370 mRNA upstream 6705 22130285 ~ 22132482 (+) True AMCG00005370
AMCG00005366 mRNA upstream 8938 22123782 ~ 22130249 (+) True AMCG00005366
AMCG00005364 mRNA upstream 16216 22116489 ~ 22122971 (+) True AMCG00005364
AMCG00005357 mRNA upstream 77720 22060209 ~ 22061467 (+) True AMCG00005357
AMCG00005358 mRNA upstream 108089 22024523 ~ 22031098 (+) True AMCG00005358
AMCG00005381 mRNA downstream 30653 22175486 ~ 22178376 (+) True AMCG00005381
AMCG00005378 mRNA downstream 36831 22181664 ~ 22198741 (+) True AMCG00005378
AMCG00005376 mRNA downstream 55352 22200185 ~ 22211145 (+) True AMCG00005376
AMCG00005377 mRNA downstream 79739 22224572 ~ 22229979 (+) True AMCG00005377
AMCG00005379 mRNA downstream 99471 22244304 ~ 22245551 (+) True AMCG00005379
TU184992 other upstream 155043 21957440 ~ 21984144 (+) True G147029
TU184996 other upstream 169495 21968302 ~ 21969692 (+) False AMCG00005351
TU184986 other upstream 186305 21952569 ~ 21952882 (+) True G147025
TU184980 other upstream 191196 21945558 ~ 21947991 (+) True G147021
TU184903 other upstream 251742 21885270 ~ 21887445 (+) False AMCG00005345

Expression Profile