RNA id: TU130354



Basic Information


Item Value
RNA id TU130354
length 274
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G104278
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 10946001 ~ 10946274 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgttctgacccagtcgtctagccatcacaatttggcccttgtcaaagtcgctcagatccttactcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataacgagattatcagtgttattcacttcacctgtcagtggtcataatgttatggctgatcggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU130348 lncRNA downstream 222045 10723590 ~ 10723956 (-) True G104272
TU130156 lncRNA downstream 1533079 9410589 ~ 9412922 (-) True G104126
TU130116 lncRNA downstream 1680514 9237791 ~ 9265487 (-) True G104098
TU130052 lncRNA downstream 1980422 8965372 ~ 8965579 (-) True G104055
TU130051 lncRNA downstream 1980720 8964717 ~ 8965281 (-) True G104054
TU130406 lncRNA upstream 469916 11416190 ~ 11420103 (-) True G104315
TU130411 lncRNA upstream 474475 11420749 ~ 11426225 (-) True G104319
TU130443 lncRNA upstream 564949 11511223 ~ 11593619 (-) True G104341
TU130445 lncRNA upstream 640784 11587058 ~ 11594342 (-) True G104342
TU130492 lncRNA upstream 702731 11649005 ~ 11656833 (-) True G104376
AMCG00011092 mRNA downstream 466853 10459562 ~ 10479148 (-) True AMCG00011092
AMCG00011085 mRNA downstream 1192511 9752696 ~ 9753490 (-) True AMCG00011085
AMCG00011083 mRNA downstream 1196102 9745248 ~ 9749899 (-) True AMCG00011083
AMCG00011086 mRNA downstream 1203378 9742348 ~ 9742623 (-) False AMCG00011086
AMCG00011084 mRNA downstream 1326722 9601377 ~ 9619279 (-) True AMCG00011084
AMCG00011103 mRNA upstream 423426 11369700 ~ 11395747 (-) True AMCG00011103
AMCG00011104 mRNA upstream 485432 11431706 ~ 11434381 (-) True AMCG00011104
AMCG00011112 mRNA upstream 706728 11653002 ~ 11661299 (-) True AMCG00011112
AMCG00011114 mRNA upstream 718850 11665124 ~ 11694330 (-) True AMCG00011114
AMCG00011113 mRNA upstream 757815 11704089 ~ 11767942 (-) True AMCG00011113
TU130270 other downstream 1202216 9741133 ~ 9743785 (-) True AMCG00011086
TU130252 other downstream 1343260 9601884 ~ 9602741 (-) False AMCG00011084
TU130111 other downstream 1709808 9234411 ~ 9236193 (-) False AMCG00011058
TU129989 other downstream 2082335 8819551 ~ 8863666 (-) False AMCG00011051
TU130712 other upstream 1049139 11995413 ~ 11997786 (-) False AMCG00011140
TU130749 other upstream 1121191 12067465 ~ 12069079 (-) False AMCG00011135
TU130831 other upstream 1379823 12326097 ~ 12328282 (-) True G104629
TU130897 other upstream 1489597 12435871 ~ 12457327 (-) True AMCG00011152
TU130955 other upstream 1602015 12548289 ~ 12548993 (-) True G104715

Expression Profile