RNA id: AMCG00013703


Basic Information

Item Value
RNA id AMCG00013703
length 738
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00013703
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39408255 ~ 39411248 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGCTTTTTGAGACCAACCCGTACTTCTTCCCCGACCAGAGGTTCTATGAGGGAAATGGGGAAAATTATTTCCCTTCCCGGCTGCAGGGGGGCTTCGATCAGACGGCCTACCAGGAGCGGCCCATGATGGGACTGTGCTCTGACAGCAGGCTCCTGTCTGGGGCGGGCTTGGAGGACAAGGTGTCTCCAGGGTCCAGCATGTCACCCCAGGAGCACTGCCCAGGCCAGTGTTTGCCCTGGGCTTGTAAGATCTGCAAGCGCAAATCGGTCACCATGGACCGCCGGAAAGCTGCCACCCTCCGGGAGAAGCGGCGGCTGAAGAAGGTCAACGAGGCTTTCGAGGCGCTCAAGAGGAGCACGCTGATGAACCCCAACCAGAGGCTGCCCAAGGTGGAGATCCTGCGCAGTGCCATCCAGTACATCGAGAGGCTGCAGGCCCTGGTCAGCTCACTGAACCAGCAGGAGCGAGAGCAGCAGGGAGGGATGCATTACAGGGGCTCAGGATCCCAGAGGGTGTCCTCGTCCAGTGAGCAGGGCTCTGGGAGCACCTGTTGCAGCAGCCCGGAGTGGAGCAGTCCCTCAGACCACTGTGGAAACGCCTACACCAACCACCCTGATGaCCTTCTGAATGAGGATTCTTCAGAGCAACCAAACCTTCGTTCCCTGACCTCCATAGTAGACAGCATCACTGTGGAGGGGGCGGCTGTTACTTACACAGGCGACATTTCCAAATGA

Function

GO: NA

KEGG:

id description
K18483 MYF4, MYOG; myogenic factor 4 (myogenin)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57562 lncRNA downstream 230280 39174555 ~ 39177975 (-) True G46175
TU57533 lncRNA downstream 436676 38959554 ~ 38971579 (-) True AMCG00013691
TU57528 lncRNA downstream 463194 38944813 ~ 38945061 (-) True G46144
TU57517 lncRNA downstream 577523 38826504 ~ 38830732 (-) True G46134
TU57489 lncRNA downstream 640020 38767426 ~ 38768235 (-) True G46114
TU57643 lncRNA upstream 7243 39418491 ~ 39418739 (-) True G46236
TU57645 lncRNA upstream 117699 39528947 ~ 39530228 (-) True G46238
TU57649 lncRNA upstream 134323 39545571 ~ 39553245 (-) True G46240
TU57648 lncRNA upstream 141003 39552251 ~ 39553245 (-) False G46240
TU57650 lncRNA upstream 141003 39552251 ~ 39553245 (-) False G46240
AMCG00013701 mRNA downstream 131606 39270881 ~ 39276649 (-) True AMCG00013701
AMCG00013700 mRNA downstream 139596 39266509 ~ 39268659 (-) True AMCG00013700
AMCG00013698 mRNA downstream 145608 39254843 ~ 39262647 (-) True AMCG00013698
AMCG00013699 mRNA downstream 153612 39233635 ~ 39254643 (-) True AMCG00013699
AMCG00013696 mRNA downstream 205987 39198815 ~ 39202268 (-) True AMCG00013696
AMCG00013710 mRNA upstream 161776 39573024 ~ 39576044 (-) True AMCG00013710
AMCG00013709 mRNA upstream 182809 39594057 ~ 39597610 (-) True AMCG00013709
AMCG00013714 mRNA upstream 276449 39687697 ~ 39703006 (-) True AMCG00013714
AMCG00013713 mRNA upstream 292612 39703860 ~ 39713357 (-) True AMCG00013713
AMCG00013717 mRNA upstream 336843 39748091 ~ 39749050 (-) True AMCG00013717
TU57492 other downstream 625106 38782093 ~ 38783149 (-) False AMCG00013685
TU57455 other downstream 707181 38697395 ~ 38701074 (-) True AMCG00013677
TU57301 other downstream 924499 38478552 ~ 38483756 (-) False AMCG00013661
TU57307 other downstream 924499 38478552 ~ 38483756 (-) True AMCG00013661
TU57286 other downstream 956908 38448267 ~ 38451347 (-) False AMCG00013650
TU57766 other upstream 862143 40273391 ~ 40275098 (-) True G46333
TU57809 other upstream 974813 40386061 ~ 40428625 (-) True AMCG00013730
TU57869 other upstream 1175568 40586816 ~ 40587392 (-) True G46418
TU57875 other upstream 1192353 40603601 ~ 40608528 (-) True G46423
TU58280 other upstream 3288258 42699506 ~ 42701068 (-) True G46742

Expression Profile