RNA id: AMCG00014319


Basic Information

Item Value
RNA id AMCG00014319
length 732
RNA type mRNA
GC content 0.52
exon number 5
gene id AMCG00014319
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9047304 ~ 9050642 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGGCTGTGCTGAAGGGTGTTCCTGAGCATGTGAGCAATGCCAGACTCAACTTCCCTCGACTGGCTCCTGGACAGGCTGTTCTCGCCCGCTGGTCACACGATGGCTGTTATTACCATAGTTCAGTTATCCACTGCTGTGGAGACCAGAGCTACTTCTTGCAGAACAAGGATGGAGAGCTGGAGAGAATCTGGAGAGAAGACATCATCACAGAAGGCGATGACCTAGAACATGTCATTcagGACAAAGATCCTGTAATTGGTGCCCATCCTTTGTATCCGGAGTGCTTCTGCCCTGGAGTGGTTTTGAAGGTCCTGGATAACCTAAAGCTGGAGGTCAGGTATTACGATGGGACGGAAGCTCGGGTCTCCAGAGAGCAGGCCTATTGGATTCCTGCTCAGAAGTTCGATCAGGACGTAGCCTACATGCTGGAATGTGAAGAACGGTGGGTCAGGCAGCCAGTGGTGGCCAGAGATGATGAAACTGGGACTTATCACCTTGCCGAGGTGCAGCAGAGAGTAGCGGACGGAAAACACTATGTGATTCGCTGGAGCGATGGCAAGAGCACGATCCAGAGGAAGTCTTTCATTTTTGGGAAGTATAGTCGCCCACACACGCTGGCGGTGGGAGACTTCGTGCTCTCATTAGCGGATCCTGTCTCTCTGACTTTCCTGCCCGGCACAGTCCGTGGGTTCAACGGCACTAAACTGGATATACAGTTCATTAACGGAAAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86513 lncRNA downstream 48678 8998426 ~ 8998626 (-) True G69250
TU86493 lncRNA downstream 156465 8890556 ~ 8890839 (-) True G69233
TU86331 lncRNA downstream 796743 8226494 ~ 8250561 (-) True G69086
TU86291 lncRNA downstream 911110 8134903 ~ 8136194 (-) True AMCG00014297
TU86202 lncRNA downstream 1172946 7874153 ~ 7874358 (-) True G68981
TU86641 lncRNA upstream 299146 9349788 ~ 9355238 (-) True G69352
TU86667 lncRNA upstream 539182 9589824 ~ 9590081 (-) True G69372
TU86668 lncRNA upstream 540534 9591176 ~ 9591381 (-) True G69373
TU86677 lncRNA upstream 844084 9894726 ~ 9895580 (-) True G69382
TU86687 lncRNA upstream 850715 9901357 ~ 9912021 (-) True G69391
AMCG00014317 mRNA downstream 7259 9030105 ~ 9040045 (-) True AMCG00014317
AMCG00014311 mRNA downstream 289123 8731578 ~ 8758181 (-) True AMCG00014311
AMCG00014310 mRNA downstream 432303 8601162 ~ 8615001 (-) True AMCG00014310
AMCG00014312 mRNA downstream 508255 8536937 ~ 8539049 (-) True AMCG00014312
AMCG00014304 mRNA downstream 712852 8330056 ~ 8334452 (-) True AMCG00014304
AMCG00014320 mRNA upstream 10391 9061033 ~ 9085213 (-) True AMCG00014320
AMCG00014318 mRNA upstream 80773 9131415 ~ 9135387 (-) True AMCG00014318
AMCG00014326 mRNA upstream 93896 9144538 ~ 9147337 (-) True AMCG00014326
AMCG00014325 mRNA upstream 166227 9216869 ~ 9228627 (-) True AMCG00014325
AMCG00014328 mRNA upstream 254597 9305239 ~ 9316906 (-) False AMCG00014328
TU86412 other downstream 663080 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 888714 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 908178 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 1624013 7417598 ~ 7423291 (-) False AMCG00014278
TU86038 other downstream 1666524 7378088 ~ 7380780 (-) True AMCG00014271
TU86630 other upstream 259809 9310451 ~ 9317167 (-) True AMCG00014328
TU86854 other upstream 1746074 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 2609379 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 19279097 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 20338648 29389290 ~ 29398305 (-) True G72477

Expression Profile