Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014390 |
| length | 1037 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | AMCG00014390 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 11984073 ~ 12003809 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0019221 | cytokine-mediated signaling pathway | biological_process |
| GO:0004908 | interleukin-1 receptor activity | molecular_function |
| id | description |
|---|---|
| K05170 | IL1RAPL, IL1R8_9; interleukin 1 receptor accessory protein-like |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87141 | lncRNA | downstream | 103617 | 11879097 ~ 11880456 (-) | True | G69759 |
| TU87123 | lncRNA | downstream | 212680 | 11769690 ~ 11771393 (-) | True | G69743 |
| TU86933 | lncRNA | downstream | 846987 | 11132788 ~ 11137086 (-) | False | AMCG00014365 |
| TU86856 | lncRNA | downstream | 1163001 | 10815771 ~ 10821072 (-) | True | G69539 |
| TU86853 | lncRNA | downstream | 1187884 | 10795883 ~ 10796189 (-) | True | G69536 |
| TU87239 | lncRNA | upstream | 966444 | 12970253 ~ 12970555 (-) | True | G69849 |
| TU87308 | lncRNA | upstream | 1081554 | 13085363 ~ 13086345 (-) | True | G69896 |
| TU87309 | lncRNA | upstream | 1081554 | 13085363 ~ 13086345 (-) | False | G69896 |
| TU87311 | lncRNA | upstream | 1081554 | 13085363 ~ 13086345 (-) | False | G69896 |
| TU87328 | lncRNA | upstream | 1083799 | 13087608 ~ 13096336 (-) | False | AMCG00014412 |
| AMCG00014384 | mRNA | downstream | 88190 | 11893760 ~ 11895883 (-) | True | AMCG00014384 |
| AMCG00014386 | mRNA | downstream | 92600 | 11882495 ~ 11891473 (-) | True | AMCG00014386 |
| AMCG00014385 | mRNA | downstream | 116544 | 11866611 ~ 11867529 (-) | True | AMCG00014385 |
| AMCG00014379 | mRNA | downstream | 228612 | 11750191 ~ 11755461 (-) | True | AMCG00014379 |
| AMCG00014380 | mRNA | downstream | 261620 | 11697189 ~ 11722453 (-) | True | AMCG00014380 |
| AMCG00014391 | mRNA | upstream | 193230 | 12197039 ~ 12199190 (-) | True | AMCG00014391 |
| AMCG00014389 | mRNA | upstream | 717933 | 12721742 ~ 12726644 (-) | True | AMCG00014389 |
| AMCG00014395 | mRNA | upstream | 725918 | 12729727 ~ 12739665 (-) | True | AMCG00014395 |
| AMCG00014396 | mRNA | upstream | 774674 | 12778483 ~ 12780838 (-) | True | AMCG00014396 |
| AMCG00014397 | mRNA | upstream | 846198 | 12850007 ~ 12875536 (-) | True | AMCG00014397 |
| TU87063 | other | downstream | 321580 | 11660021 ~ 11662493 (-) | False | AMCG00014374 |
| TU86854 | other | downstream | 1185926 | 10796716 ~ 10798147 (-) | True | G69537 |
| TU86630 | other | downstream | 2666906 | 9310451 ~ 9317167 (-) | True | AMCG00014328 |
| TU86412 | other | downstream | 3599849 | 8383285 ~ 8384224 (-) | True | G69156 |
| TU86302 | other | downstream | 3825483 | 8156229 ~ 8158590 (-) | True | AMCG00014298 |
| TU90285 | other | upstream | 16325930 | 28329739 ~ 28332482 (-) | True | G72236 |
| TU90581 | other | upstream | 17385481 | 29389290 ~ 29398305 (-) | True | G72477 |
| TU91283 | other | upstream | 20259358 | 32263167 ~ 32263427 (-) | True | G73047 |
| TU91373 | other | upstream | 20593653 | 32597462 ~ 32614806 (-) | True | G73127 |
| TU91374 | other | upstream | 20593653 | 32597462 ~ 32619149 (-) | False | G73127 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00008305 | True | 1407 | mRNA | 0.57 | 6 | NC_007122.7 | 44400864 ~ 44409856 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000306_00006427_00026938.mRNA | True | 3495 | mRNA | 0.43 | 9 | CI01000306 | 5306 ~ 27452 (-) |
