RNA id: TU124223


Basic Information

Item Value
RNA id TU124223
length 301
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G99476
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15314153 ~ 15314453 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtacacagtatccagatgagctctaactagtgcattgtacagtctgaacattactgcccttgttctcaattctacacttttgacaatataccctaacactctgtttgccttttttattgcttccccacattgtttggatggagaaagtgaggagtccacatagactcctaggtctttctcatgcgttacttcatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124192 lncRNA downstream 61436 15249901 ~ 15252717 (-) False AMCG00015660
TU124193 lncRNA downstream 61436 15249901 ~ 15252717 (-) True AMCG00015660
TU124194 lncRNA downstream 61436 15249901 ~ 15252717 (-) False AMCG00015660
TU124162 lncRNA downstream 132167 15053296 ~ 15181986 (-) True G99424
TU124171 lncRNA downstream 187482 15124635 ~ 15126671 (-) True G99430
TU124269 lncRNA upstream 250673 15565126 ~ 15565391 (-) True G99513
TU124272 lncRNA upstream 317942 15632395 ~ 15632608 (-) True G99516
TU124299 lncRNA upstream 439363 15753816 ~ 15754026 (-) True G99535
TU124360 lncRNA upstream 564965 15879418 ~ 15883521 (-) True G99565
TU124372 lncRNA upstream 587998 15902451 ~ 15959831 (-) True G99576
AMCG00015660 mRNA downstream 61432 15249977 ~ 15252721 (-) False AMCG00015660
AMCG00015658 mRNA downstream 69259 15236134 ~ 15244894 (-) True AMCG00015658
AMCG00015659 mRNA downstream 113362 15170616 ~ 15200791 (-) True AMCG00015659
AMCG00015655 mRNA downstream 206128 15094120 ~ 15108025 (-) True AMCG00015655
AMCG00015652 mRNA downstream 358323 14949243 ~ 14955830 (-) True AMCG00015652
AMCG00015662 mRNA upstream 23583 15338036 ~ 15339062 (-) True AMCG00015662
AMCG00015664 mRNA upstream 240712 15555165 ~ 15557776 (-) True AMCG00015664
AMCG00015666 mRNA upstream 373189 15687642 ~ 15703121 (-) False AMCG00015666
AMCG00015667 mRNA upstream 478060 15792513 ~ 15814359 (-) True AMCG00015667
AMCG00015672 mRNA upstream 743349 16057802 ~ 16060001 (-) True AMCG00015672
TU124200 other downstream 53669 15259461 ~ 15260484 (-) True G99454
TU124167 other downstream 124759 15102617 ~ 15189394 (-) True G99426
TU124175 other downstream 142481 15170615 ~ 15171672 (-) False AMCG00015659
TU124012 other downstream 575879 14690387 ~ 14738274 (-) False AMCG00015645
TU124002 other downstream 618783 14690870 ~ 14695370 (-) True AMCG00015645
TU124288 other upstream 386625 15701078 ~ 15703290 (-) True AMCG00015666
TU124430 other upstream 703130 16017583 ~ 16102456 (-) True G99605
TU124478 other upstream 907312 16221765 ~ 16222155 (-) True G99646
TU124562 other upstream 1214924 16529377 ~ 16535468 (-) True AMCG00015691
TU124837 other upstream 2523127 17837580 ~ 17837942 (-) True G99939

Expression Profile