RNA id: TU125356



Basic Information


Item Value
RNA id TU125356
length 434
RNA type TUCP
GC content 0.43
exon number 2
gene id G100338
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 20267407 ~ 20268285 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTCAGATTTAAGGGGGAGAAGACTATATTTGAATGATTTTGATTATGCTGTACTTTCTGTATGTTTTGCTTTGCCCCCATTCAGACCGTGCTGTTCCTTGCCATATCAAGTCTCTAAGAACACAGAAGGTGGTTTATATCTGTTGTGGGGATGAGCACACTGCAGCCCTGACAAAGGATGGCGGCCTGTTCACTTTTGGAGATGGCTCAGGAGGGCAGTTGGGACACGATTCTACAAACAACGAGGTCCTTCCCAGAAGAGTTCTGGAGCTGATGGGCAGTGAAGTATCTCAAATAGCCTGTGGCAGGTAGAGGCTCTCCTCATTTTCTAAAAACTCTTAAGAAGAATTGCAGCACATCAGTTTAAAATGGCTAAACATTTTGTAACTTAAGGGTATCATAGGACTTGTGAATGCTGTTATTAGGAAAAGTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU125233 lncRNA upstream 484644 19728656 ~ 19782763 (+) False G100241
TU125235 lncRNA upstream 492117 19726572 ~ 19775290 (+) False G100241
TU125234 lncRNA upstream 536843 19726572 ~ 19730564 (+) True G100241
TU125231 lncRNA upstream 537879 19728656 ~ 19729528 (+) False G100241
TU125219 lncRNA upstream 554163 19712887 ~ 19713244 (+) True G100232
TU125368 lncRNA downstream 56325 20324610 ~ 20327167 (+) True G100349
TU125492 lncRNA downstream 511061 20779346 ~ 20780467 (+) True G100461
TU125516 lncRNA downstream 560043 20828328 ~ 20828614 (+) True G100483
TU125537 lncRNA downstream 795765 21064050 ~ 21065385 (+) True G100502
TU125542 lncRNA downstream 1038321 21306606 ~ 21310605 (+) True G100507
AMCG00015758 mRNA upstream 42318 20184189 ~ 20225089 (+) True AMCG00015758
AMCG00015757 mRNA upstream 121777 20136688 ~ 20145630 (+) True AMCG00015757
AMCG00015754 mRNA upstream 155468 20110705 ~ 20111939 (+) True AMCG00015754
AMCG00015756 mRNA upstream 229000 20035348 ~ 20038407 (+) True AMCG00015756
AMCG00015747 mRNA upstream 299065 19960544 ~ 19968342 (+) True AMCG00015747
AMCG00015759 mRNA downstream 6658 20274943 ~ 20299858 (+) True AMCG00015759
AMCG00015765 mRNA downstream 216602 20484887 ~ 20501432 (+) True AMCG00015765
AMCG00015768 mRNA downstream 287590 20555875 ~ 20556255 (+) True AMCG00015768
AMCG00015766 mRNA downstream 318585 20586870 ~ 20619770 (+) True AMCG00015766
AMCG00015767 mRNA downstream 354508 20622793 ~ 20656527 (+) True AMCG00015767
TU125009 other upstream 1495441 18744887 ~ 18771966 (+) True AMCG00015725
TU124919 other upstream 1941503 18320056 ~ 18325904 (+) True G100007
TU124723 other upstream 3135658 17098459 ~ 17131749 (+) False AMCG00015703
TU124453 other upstream 4136020 16131044 ~ 16131387 (+) True G99624
TU124310 other upstream 4465773 15796950 ~ 15801634 (+) True G99541
TU125724 other downstream 2411925 22680210 ~ 22680773 (+) False AMCG00015796
TU126202 other downstream 4596804 24865089 ~ 24865552 (+) True G101061
TU126442 other downstream 5995630 26263915 ~ 26264308 (+) True G101248
TU126474 other downstream 6104868 26373153 ~ 26377699 (+) True G101275
TU126639 other downstream 7622267 27890552 ~ 27992014 (+) False G101400

Expression Profile