Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00016872 |
| length | 762 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 2 |
| gene id | AMCG00016872 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 32986580 ~ 32989958 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005581 | collagen trimer | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20283 | lncRNA | upstream | 4250 | 32981779 ~ 32982330 (+) | True | G16323 |
| TU20241 | lncRNA | upstream | 127564 | 32857551 ~ 32859016 (+) | True | G16290 |
| TU20144 | lncRNA | upstream | 543995 | 32438254 ~ 32442585 (+) | True | G16211 |
| TU20094 | lncRNA | upstream | 723908 | 32261711 ~ 32262672 (+) | True | G16169 |
| TU20089 | lncRNA | upstream | 733351 | 32251814 ~ 32253229 (+) | False | AMCG00016841 |
| TU20320 | lncRNA | downstream | 189747 | 33179705 ~ 33179940 (+) | True | G16350 |
| TU20321 | lncRNA | downstream | 190281 | 33180239 ~ 33180439 (+) | True | G16351 |
| TU20374 | lncRNA | downstream | 335136 | 33325094 ~ 33328342 (+) | True | G16395 |
| TU20376 | lncRNA | downstream | 338839 | 33328797 ~ 33333746 (+) | True | AMCG00016880 |
| TU20498 | lncRNA | downstream | 656530 | 33646488 ~ 33648455 (+) | False | AMCG00016898 |
| AMCG00016866 | mRNA | upstream | 65353 | 32895759 ~ 32921227 (+) | True | AMCG00016866 |
| AMCG00016865 | mRNA | upstream | 130279 | 32810085 ~ 32856301 (+) | True | AMCG00016865 |
| AMCG00016863 | mRNA | upstream | 209108 | 32773075 ~ 32777472 (+) | True | AMCG00016863 |
| AMCG00016861 | mRNA | upstream | 379198 | 32590767 ~ 32607382 (+) | True | AMCG00016861 |
| AMCG00016854 | mRNA | upstream | 483208 | 32499691 ~ 32503372 (+) | False | AMCG00016854 |
| AMCG00016873 | mRNA | downstream | 22960 | 33012918 ~ 33021870 (+) | True | AMCG00016873 |
| AMCG00016875 | mRNA | downstream | 45344 | 33035302 ~ 33109567 (+) | True | AMCG00016875 |
| AMCG00016874 | mRNA | downstream | 158533 | 33148491 ~ 33151617 (+) | True | AMCG00016874 |
| AMCG00016885 | mRNA | downstream | 186313 | 33176271 ~ 33177932 (+) | True | AMCG00016885 |
| AMCG00016886 | mRNA | downstream | 217514 | 33207472 ~ 33221284 (+) | True | AMCG00016886 |
| TU20240 | other | upstream | 129140 | 32856361 ~ 32857440 (+) | True | G16289 |
| TU20166 | other | upstream | 483324 | 32499056 ~ 32503256 (+) | True | AMCG00016854 |
| TU20164 | other | upstream | 483324 | 32499576 ~ 32503256 (+) | False | AMCG00016854 |
| TU20165 | other | upstream | 483324 | 32500796 ~ 32503256 (+) | False | AMCG00016854 |
| TU19916 | other | upstream | 1252264 | 31728556 ~ 31734316 (+) | False | AMCG00016830 |
| TU20517 | other | downstream | 678671 | 33668629 ~ 33672620 (+) | True | AMCG00016901 |
| TU20550 | other | downstream | 1057413 | 34047371 ~ 34047720 (+) | True | G16546 |
| TU20555 | other | downstream | 1110357 | 34100315 ~ 34100863 (+) | True | G16550 |
| TU21320 | other | downstream | 5506093 | 38496051 ~ 38503632 (+) | True | G17193 |
| TU21955 | other | downstream | 9401339 | 42391297 ~ 42397787 (+) | True | G17697 |
