RNA id: TU19453



Basic Information


Item Value
RNA id TU19453
length 388
RNA type TUCP
GC content 0.59
exon number 1
gene id G15659
representative True

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30236454 ~ 30236841 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGAATTGCAGCCGTAGGGTTTTTCCTACTGTATTATGATTGCCTGGCGCTGGCAAGTGAGTGCATCTTTCAATGGGACCCAGCATCCTGGAAGTCTCTGCTCTCCACCTTCGATCCCATTTCAGTTCAGAAGAGCTCCATGTGCCATTATGATTCGAGTAAGACCACAAGAGGAGGAAACAAGAGTCATCTCTCCCTTTCCTCCCTCAGTCACTTCCTTTATCTTCTGTCCGCTTGCCTGTATTCACCTCTGTACCCATCTGCTCTCTGTTGCTTTGGCCTGTCCCTTTATTTCTCTGATGTCCATCCCTCCACTATACTCTCCCCTCcaccattttatatatttcaggtTTCCCCTGTTCTTTAGTACACCCTGTTTCAGTCATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19445 lncRNA upstream 20744 30213172 ~ 30215710 (+) True G15651
TU19400 lncRNA upstream 128738 30022607 ~ 30107716 (+) False AMCG00016769
TU19390 lncRNA upstream 216767 29930664 ~ 30019687 (+) False G15605
TU19389 lncRNA upstream 216767 30015818 ~ 30019687 (+) True G15605
TU19374 lncRNA upstream 342960 29890916 ~ 29893494 (+) True G15591
TU19550 lncRNA downstream 192212 30429053 ~ 30431794 (+) True G15730
TU19650 lncRNA downstream 668769 30905610 ~ 30906839 (+) True G15817
TU19680 lncRNA downstream 769056 31005897 ~ 31007006 (+) True G15847
TU19686 lncRNA downstream 796228 31033069 ~ 31033321 (+) True G15853
TU19814 lncRNA downstream 1238466 31475307 ~ 31476218 (+) True G15961
AMCG00016776 mRNA upstream 23339 30178824 ~ 30213115 (+) True AMCG00016776
AMCG00016771 mRNA upstream 113383 30118014 ~ 30123071 (+) True AMCG00016771
AMCG00016770 mRNA upstream 123170 30109609 ~ 30113284 (+) False AMCG00016770
AMCG00016769 mRNA upstream 128727 30100541 ~ 30107727 (+) True AMCG00016769
AMCG00016772 mRNA upstream 153109 30073039 ~ 30083345 (+) True AMCG00016772
AMCG00016778 mRNA downstream 17695 30254536 ~ 30255713 (+) True AMCG00016778
AMCG00016781 mRNA downstream 24845 30261686 ~ 30262981 (+) True AMCG00016781
AMCG00016777 mRNA downstream 30142 30266983 ~ 30278893 (+) True AMCG00016777
AMCG00016782 mRNA downstream 122626 30359467 ~ 30360383 (+) True AMCG00016782
AMCG00016785 mRNA downstream 140905 30377746 ~ 30410379 (+) True AMCG00016785
TU19434 other upstream 123170 30109599 ~ 30113284 (+) True AMCG00016770
TU19422 other upstream 152926 30081254 ~ 30083528 (+) False AMCG00016772
TU19419 other upstream 161558 30072938 ~ 30074896 (+) False AMCG00016772
TU18924 other upstream 2130743 28104737 ~ 28105711 (+) True G15223
TU18876 other upstream 2357757 27872663 ~ 27878697 (+) True AMCG00016702
TU19688 other downstream 822499 31059340 ~ 31061145 (+) True G15855
TU19913 other downstream 1485098 31721939 ~ 31727017 (+) True AMCG00016829
TU19916 other downstream 1491715 31728556 ~ 31734316 (+) False AMCG00016830
TU20166 other downstream 2262215 32499056 ~ 32503256 (+) True AMCG00016854
TU20164 other downstream 2262735 32499576 ~ 32503256 (+) False AMCG00016854

Expression Profile