RNA id: TU24839



Basic Information


Item Value
RNA id TU24839
length 388
RNA type TUCP
GC content 0.61
exon number 2
gene id G20013
representative False

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 54307795 ~ 54392591 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgcatgtgTTCTCTTTTGCGTGTGCTGTAGTCTGTATGGTATTTGCCGTGTGTGGTCTGTGTATCGAGAGTTGTGCAGCGGGCCTACAGCACGTCCAGCAGGGTGTCGATCCGGGCCACCAGCTCCTGCCGGCGCGAGGACAGCTGCCGCTCGCTCTCCAGGTACGCCTCCTTCTTCAGCTTCCCACCCACCAGCCGCTCGGCCTCCTGCACGGCGCGCCACGCCAGCTCCTTCACCTGCCCGTCCAGCTTCTGGATCTCGGACACCTGGGGACGAGTTGGACCCAGAGAGTGAGTGGTAGAAAGAGGAGCGACAAGAAGCAGCACACATCCCTCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24827 lncRNA upstream 136372 54171215 ~ 54171423 (+) True G20006
TU24771 lncRNA upstream 249875 54056860 ~ 54057920 (+) True G19958
TU24691 lncRNA upstream 266762 53948758 ~ 54041033 (+) True G19899
TU24674 lncRNA upstream 345957 53959463 ~ 53961838 (+) True G19887
TU24693 lncRNA upstream 358766 53948758 ~ 53949029 (+) False G19899
TU24855 lncRNA downstream 25189 54343402 ~ 54345777 (+) True G20028
TU24878 lncRNA downstream 124325 54442538 ~ 54444003 (+) False AMCG00017357
TU24951 lncRNA downstream 233927 54552140 ~ 54555325 (+) True G20086
TU24949 lncRNA downstream 260868 54579081 ~ 54582399 (+) False G20085
TU25014 lncRNA downstream 297028 54615241 ~ 54615448 (+) True G20136
AMCG00017347 mRNA upstream 99074 54205132 ~ 54208721 (+) True AMCG00017347
AMCG00017340 mRNA upstream 137285 54153607 ~ 54170510 (+) True AMCG00017340
AMCG00017336 mRNA upstream 251130 54036514 ~ 54056665 (+) True AMCG00017336
AMCG00017335 mRNA upstream 274758 54013561 ~ 54033037 (+) True AMCG00017335
AMCG00017331 mRNA upstream 371313 53915154 ~ 53936482 (+) True AMCG00017331
AMCG00017349 mRNA downstream 7123 54325336 ~ 54335011 (+) True AMCG00017349
AMCG00017354 mRNA downstream 17727 54335940 ~ 54343047 (+) True AMCG00017354
AMCG00017350 mRNA downstream 34493 54352706 ~ 54357989 (+) True AMCG00017350
AMCG00017351 mRNA downstream 41796 54360009 ~ 54366128 (+) True AMCG00017351
AMCG00017348 mRNA downstream 48523 54366736 ~ 54372123 (+) True AMCG00017348
TU24774 other upstream 241608 54064358 ~ 54066187 (+) True G19961
TU24769 other upstream 252620 54054800 ~ 54055175 (+) True G19956
TU24688 other upstream 360177 53939537 ~ 53947618 (+) True G19896
TU24638 other upstream 443077 53864108 ~ 53864718 (+) True G19860
TU24632 other upstream 451956 53853907 ~ 53855839 (+) True G19854
TU24970 other downstream 209539 54527752 ~ 54529204 (+) True G20099
TU24950 other downstream 255261 54573474 ~ 54582399 (+) True G20085
TU25035 other downstream 345098 54663311 ~ 54664526 (+) True G20156
TU25114 other downstream 490273 54808486 ~ 54809106 (+) True AMCG00017381

Expression Profile