RNA id: AMCG00018030


Basic Information

Item Value
RNA id AMCG00018030
length 1059
RNA type mRNA
GC content 0.52
exon number 11
gene id AMCG00018030
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32975931 ~ 33015403 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCATGTGAGAGCTGCTTCTGCGGTTGTCTCTCTGGGCAGCAGAGGTCCAGGCTGATGAGCCACAGTGGCCACCTCTCTGTGGACAGGGGAGCTGGGCCCAGACCAAGTGCTGAGGCAGCTGGAGATGACAACAAGCTGACGCTCAAGCCCCGTCTCCAGCGAGGGGGCAGCTCGGCCTCACTGCACAACAGTCTGATGAGGAACAGCATCTTCCAACTGATGATCCACACGCTGGACCCCCTTGCAGAAGAATTTGCTGATTCTGGGAGATTTCGAGAAAAGGCATCCATTCTTCATAAGATTGCCAAAAAGAAATGCCAAGTGGAGGACAGCGAAAAAGTCAACGGTATGGCAAACCGCGCTGACAAAGTCGACCTTCCAAACAGCGCCAATGTAGAAGTGGAGGGAGGTGATGATGGGGATGATGACGATGACCAGCCTCTCAGCCTGGCCTGGCCAGAAACAAACCGCAAGCGCTGCACCTACCTGATCATCATGCCCATCGTCCTCCCGCTGTGGCTCACTCTTCCCGATGTCAGGAAACCAACCTCAAAGAAATTTTTTCCTATCACATTTTTCGGCGCCATCTGCTGGATTGCAGGATTCTCCTATCTCATGGTCTGGTGGGCACATCAGAGTCTGCTTTTAATTCAAGGGATTACAGAAGAGATCATGGGTCTGACCATATTAGCAGCTGGCACCTCCATTCCCGACCTCATCACAAGTGTCATTGTGGCTCGGAAGGGGCTCGGGGACATGGCCGTGTCCAGCTCTGTGGGCAGCAATATCTTTGACATCACTGTTGGACTTCCCCTGCCGTGGCTCCTGTTCTCCTTCATTCACAATATGGCGCCAGTAGCAGTGAGCAGCAATGGGCTGTTCTGCGCAATTGTTCTCCTCTTCCTCATGCTGCTTTTTGTCATCATTTCCATCGCTGTATGCAAGTGGAGGATGAGCAAGATCCTGGGCTTAACCATGTTCCTACTTTACTTTGTATTCCTGGTGGTAAGCGTCATGCTGGAGGACAAAGTCATTGTGTGCCCAGTTTCCATCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118400 lncRNA upstream 178433 32794755 ~ 32797498 (+) True G94906
TU118399 lncRNA upstream 182790 32789825 ~ 32793141 (+) False AMCG00018027
TU118392 lncRNA upstream 213348 32746824 ~ 32762583 (+) True G94899
TU118325 lncRNA upstream 440031 32517123 ~ 32535900 (+) True G94858
TU118290 lncRNA upstream 509295 32461298 ~ 32466636 (+) False G94838
AMCG00018034 mRNA upstream 28125 32946868 ~ 32947806 (+) True AMCG00018034
AMCG00018033 mRNA upstream 61202 32913321 ~ 32914729 (+) True AMCG00018033
AMCG00018026 mRNA upstream 130631 32841023 ~ 32845300 (+) True AMCG00018026
AMCG00018027 mRNA upstream 182327 32789441 ~ 32793604 (+) True AMCG00018027
AMCG00018017 mRNA upstream 323247 32607413 ~ 32652684 (+) True AMCG00018017
TU118319 other upstream 374482 32507690 ~ 32601449 (+) True G94857
TU118291 other upstream 510868 32461298 ~ 32465063 (+) True G94838
TU118260 other upstream 564558 32407429 ~ 32411373 (+) False AMCG00018012
TU117593 other upstream 3525584 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 4331948 28642730 ~ 28643983 (+) False AMCG00017910

Expression Profile