RNA id: AMCG00018017


Basic Information

Item Value
RNA id AMCG00018017
length 15050
RNA type mRNA
GC content 0.56
exon number 37
gene id AMCG00018017
representative True

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 32607413 ~ 32652684 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTTCGCGCTCTCGGATGTCGAGAGAAGTCCAGCTCAGTCTCGGCGTGTTTTGTCAGCCCAGATAACGGATACACTCCTCTCCACATCGCGGCCAAGAAGAACCAGATGGACATCGCCACCACGCTGCTGCAGTTCGGCGCCGAGAGCAACATCCTGACCAAGCAGGGCGTCACGCCGCTGCACCTGGGGTCCCAGGAGGGCCACGCCGACATGGTGGCGCTGCTGCTGGACAAAGGGGCCAACATCAACGTGCCAACCAAGAGCGGGCTGACTTCGCTCCACCTGGCGGCGCAGGAGGACAGGGTCGCCGTCGCAGACATCCTGGCCAAACACGACGCCAACCTGGACGCCCAGACCAAGCTGGGCTACACTCCGCTGATCGTCGCCTGTCATTACGGCAACATCAAGATGGTGAACTTCCTGCTGCAGCGAGGGGCCAACGTCAACGCCAAGACCAAGAATGGATACACCCCTCTGCACCAGGCCGCCCAGCAGGGCCACACCCACATCATCAACGTGCTGCTGCAGCACGGGGCCAAACCCAACGCCACCACTGTGAATGGCAACACTGCGCTGGCCATAGCCCGGCGTTTGGGCTACATCTCGGTGGTCGACACGCTGAAGCAGACTGTGACGGAGAAGCACAAGCTGAACGTCCCTGAGACGATGACCGAGGTCCTGGACGTGTCTGATGAGGAAGCGTGTAGACAGTGTGAGGACGACCAGTTCACTGACGGAGAGTCTATCGACCTGGAAGGAAGCCAGTACGGTATTGACCGCCGAACGCCCCTGTCCCTCTACAGTGACGACACCATGACCGGGGACGGGGGGGAGTACCTGAGGGCGGAGGACCTGAAGGACCTGGGCGATGACTCCCTGCCGGGGCAGTACCTGGACGGCATGAACTATCTGCGCTTCAGCCTGGACGGAGGCCGGTCTGACAGTTCCGACAGGTCCCACACGCCGAGCCACGCCTCCTACCTGAGGGACGGACCCATGCTCGAGAGCCTGATCTCGGCCACCAACCACCAGGTGTCCGCCCTGGCCAGGGAGACGGAGAAGGACGTGTACCGCCTGAGCCTGGGCGCTGAGGACCTGGACAACGTGGCCCTGTCCTCCAGCCCCATCCACTCCGGCTTTACACTTCTCACACACCATCTGCTGCCTGTTGTCCTGCCTTGCTACCAGGTGAGACGTCAAAGGAACGACATGAAGAAACGTAGAGTTCCTCCAGACGGTATAACGGTCTTCTACACGCCAAGTGCAGGGTTCGGGTGTTCGGGCTTCCTGGTCAGTTTCATGGTGGACGCTCGGGGCGGGGCCATGCGGGGCTGCCGTCACAATGGGCTGCGCATCATCATCCCCCCGCGCAAGTGCACCGCGCCCACCAGGGTCACCTGCCGCCTGGTGAAGCGCCATCGCCTGGCCACCATGCCCCCCATGGTGGAGGGTGAGGGCCTGGCCAGCCGGCTCATCGAGGTGGGGCCGTCCGGAGCGCAGTTCCTCGGGCCGGTCATCGTGGAGATCCCACACTTCGCGGCGCTGCGCGGCCGGGAGCGGGAGCTGGTGGTGCTGCGCAGCGAGACGGGTGAGAGCTGGAAGGAGCACCACTGCGAGCACACGGAGGACGAGCTCAACGAGATCCTCAACGGCATGGACGAAGAGCTGGACCCCCCCGAGGAGCTGGAGAAGAAGCGGATCTGCCGGATCATCACCCGGGACTTTCCGCAGTACTTCGCCGTCGTGTCGCGCATCAAGCAGGACAGCAACCTGATCGGGCCTGAGGGCGGCGTGCTGAGCAGCACCGTGGTGCCGCAGGTCCAGGCCGTGTTCCCAGAGGGCGCGCTCACCAAGAGGATCCGCGTCGGCTTGCAGtcccAGCCCATGAACGTAGACCTGGTGAGGAAGAATCTGGGCAACAAGGCGACCTTCAGCCCCatcgtgaccctggagccacgGAGAAGGAAGTTCCACAAGCCCATCACCATGACAATCCCGATCCAGGAGTCGGTGAGCTTCGCGACGCAGGTGTACCGCGAGATCATCTGCGTTCCCTACATGGCCAAGTTCGTCATCTTCGCCAAGTCGCACGACCCCATTGAGGCGCGGCTGCGCTGCTTCTGCATGACCGACGACAAGGTGGACAAGACGCTGGAGCAGCAGGAAAACTTCATTGAGGTGGCGCGGAGCCGCGACGTGGAGGTCCTGGAGGGGAAGCCCATCTACGCCGACTGCTTTGGGAATTTGGTGCCGCTGACCAAGAGCGGCCAGCACCACCTCTTCAGCTTCTTTGCCTTCAAGGAGAACCGCCTGGCCCTGTTCATCAAGGTTCGGGACAGCACTCAGGAGCCCTGCGGCCGGCTGTCCTTCATGAAGGAGCCCCGGTCCTTCCGGAGTCTGGCTCACAGCGCCATCTGCAACCTCAACATCACGCTGCCTGCCTACTCCAAGGAGTCCGATTCCGAtcaggagcaggaggaagagGCAGATGATCTCGGTCTGACGACACTGATCGTGTGGATGAAACTGACGCTTTACATGACAAACTCCCAGACTCAGCAGCAGATCTGGAGCAGGACATATGACGAAGAGACAGACTCGACCGAAACCTCTGCTCTGAAAACCCACTTGGTTCGCGACTCCCCGGCGCTCGCAAGCCCCGACTTGCTCTCCGAGGTGTCCGAGATGAAGCAGGACTTGATCAAAATGACTGCCATCCTAACCACCAACTCCACGGAGAAGTCGAGCCCCGTAGAAGGAGGCGGACTCGAAAAGGGAGCCGAAGAGGAGCCTGGGGAGCCCTTTGAAATAGTAGGAAAGGTCAAAGAAGATCTGGAGAAAGTAAGTGAGATCCTAagaagggggacctacacaggTAAGACGGAAGCGAAGAAGGGAGGTGCGAGCAGAGCAGCAAGACCAGAGGAAGAATGGGTCTTGCTGAGCCACAGTGAAATCGAAGAAGCCAAGAGAATGGCGCCTCCTGAAGTCCACGAGCCCCCTTTGCACGAGGTGAAGATCGACAGGGGCACGGCCAGAAGAGCTAAAGCGGCGAAGGATATGACCGGAATGGTGTCCCATCTGAGTGAAGATCTCAACAACTTGCTCATGCAGCCGCTAGCCAGCACCGGCTGCCGGCCTCAGGAAGACGTCATCGAGGAGCAGTTCACAGAGACCCGTGTCAGCAGGGAGAAGAAAACTGACCAGTCTTCCGAAACGGACGCTAAGTGTCCCCCGCCCGACATCAAGAAACCAGTGAGGAGGAAATTAAAGGAACGGAAAGACCGTGAGGAGGCCGACGCCCACGGGCTGAGCTCCGAGGAGTCTCTGGACGAGGACCTGATCCTGAGCACACCCGCGGCCCCGGCCCCGACGAAGGTGTCTCCGGTAGTGGAGGAGACGCCCATTGGCTCAATCAAAGAGAAGGTCAAAGCTCTTCAGAGGAAGGTGGAAGAGGAGCAGAAGGGCCGTAAGCAGACGAGCGTGAAAAGCTCAGGAGGCGACGACAGTAAATCCACTCAAATCAAAAGAGAATCAAAAATAGAACAGTCCCCTGCACCAACGTCTGGCACGACGGAAACGCTGGAAGAGACCATGTCTGTCCGCGAACTGATGAGAGCTTTCCAGACAGGGCAGGACCCGTCAAAGAGAAAGTCTGGCCTCTTTGAGCATAAAGCAACAGTCTTACAAACAGAGCATTCGAGCACAACCCAAGTCACACGCACATCCGTGTCAAAACAGGAGCATGTTGTCAGACACCATGAACAAGTCACTAGTCATGCCGTGAGCTCGTCTGTCGGTAAAGCTGGTCTTCCTGGCAAAGAGCCCCTGGGGAAAGAGTGCGATTTTCAGATCAGCCCCAATAGGAAGCACTCCACAGATTTCAGCGCCGACATTAAGGCAGAGCTGGAGGACAATGAAGAGTACCAGCAGTTTAGAAAGACCTCTATATCTGAGAAACCCGAGCTCATCCCCAGCGAGGACACGGGCTCTGCTCAACCTGAGCTGAGTATCGTCTTCCCCTCGGATCTGTCGAAGGAGGAGTTCATGACGGATATTGTCCTACAGAACGGAGCCCTTGACGACAGCTCCGAGAGCCTCAAACACGAGGGGGTTGCGGACTCGCCGAGTAACAGCTTGGGCGATGGCACGCCACAGATGAGCTCAGAGGAGAGTTATAAACATGAGGGTCTGGCAGAGACCCCAGAAACTAGCCCAGAAAGCTTGTCATTTTCACCCAAGAAAATTGACCAGCAAATATTAGAAAAGGCCAAGGAAAAGTCACTGGCCTCACACACAAAAGATGACAAGAAAAGTGCCTTGTCTACTACTCAAGAGAGTGCAGAAGTGAttaaagaaaaatctgaaagcTTGACAACTGGAGACTCTGGCGTCATGACGTTTGATGACCAGCAGTCCACAGAAATGACTCTCCCCACCTCTCCCACCGAGGAGGCGAGTGAGGATCAGACCGTGAGTGAGTCCACTTCCGCACTGAAGGGCGATGCAGTTTTCTGGAGGGATGATGCTCACGTGAAAGACAAAGTCCCTTCAGAAGCCAAACCATCTCAGCCCCAGCTCGGTTCCAAAAGGACCTCTGACACGGTCGACACATTTCTGAACCCAGAGGATGGAGAGGCACCTCAAACCGATAGATGTGCCGCCTCTATACCCACTGATCTGCCAACTGGGAAGGCGGCTCCTTGCAGTCACGATGGCCTAGACCTGCCCCTGCAGCGTCGAGACTCGGAGGCCCTCAGTCCATTAGCAGATGATTCTCTGACCATTAGTCATAAGGATTCCCTGGAAGCTAGTCCAATAATGGAAGATAATTCTTCACATAAGACTCCTGACTCCATTGAGCCCAGTCCAACCAAGGAGTCCCCGTGTCGTGACTCATTAGAGAGCAGCCCGGTGGAGCCAAAGGGCAGGCCCGGCATGCCGATGGCAGAGCAGCCCGGTGGGGCCCCTTGGCAGACCCAACCCGCAAAGGCAGACTTCCCTCCGGAGGCCGTGCGTAACAGGCTGCTCAGGGACCCCGAGGGAAGTGCGGACGATGACAGTCTGGAACAAACCTCGCAGATGGAAAGTTCAGGTAAGAGTCCTCTCTCGCCCGACACCCCCAGCTCTGAGGAAATTAGCTATGAAGTCACACCCAAAACGCCAGACCCACAGGTCCTCTTAGTGCCCTCCAAGCCCGCCGTTATCCCCGAAGACACcgaggaggcagaggaggaatATTCCTCTGATGATAGTGAGCCCCAGCGTAGGTTCACCCCAGAGGAAGAGATGTTTAAAATGGCCGCAAAAATCAAAACGTTTGACGAGATGGAGCAAGACGCCAAAACCAAGCGAGACAATCGTAGAGATTTCAGACCGATAGAGTCTTTATCTCAAGCGGGGGATGAGTGCGGCCAGGCCGTACAAGTCGAGTCTGCAGGCGACAGCTCTTCAGAGAGTGAGCCCGAGCTGACTCAGCTTAAGAAAGACTCAGAGTTCACTCTTTCCACAGCACCCATTATTAAAGTGCAACCTTCCTCTCCCTTACCACCAGGTATGCGGGGCAGCCCCAGCCCAGTCGAGACCGAAGTCCCGCCTGCAGCCTCCAGCTGTGAAGACACAGAGATGGAATCACCTTCGCAGCATCAATCCCTACAAAGTACAGACCCAATTCTCAAACCAGACTCGAGCTGCTCAACTTGGCAGTCTTTGGCAGAAGGCAGTGACATGACAGAAACATGTCACCAAGCACAGGTACCTGCTAGTTTAGAGTTTGAAGAGGAAGCAAGAGAGACAGCAGAAGTCACAAGCCCTTACGACAACGTATCTTCCCTTGTGATGTCCACGTCCACTGATCTTGCAGAGGCGACAAACAAAACCGACGAACAAAAGGAGGAGTGTTTCAAACTGTCCAGGGAAAGCGTGGAGGAGGAAGGCAACAGAACCGACACACATACAGAGTGCCCATCCACAGATAATCAGACCGGAAGCAATGCCACAGACGAAGTCAAAGACCTCCTGAGATGTTCCAGGACGCAGGAAGCCGACGGGGAAGGCCTCCACAGTGCAAGTGAACAGCGCACTCACCTGGCACAGGCACAGGAGCAGTTTAGACCAGAAATCTGTATTTATGACGACACAGAAGACAATGATGATGTGGATGAAGGCCAACAGGCACTGGGTCCCGTGACCCAGTCGAAGGGAGTCACCGCGAGAACCGAGAGCGATGTTGATTCCTGGAGCGCCATGCGAGAGGATGACGATGCCTTCGAGGCGCGGGTCAAGGAAGAAGAGCAGAAGATCCTCGGGTTGATGGTCGATCGCCAGTCGCAGGGAGCCACACCAGACACGACTCCAGGTAGGACACCGACAGAGGAGGGGACGCCAACTAGCGAGCAAAACCCTTTCTTGTTCCAGGAAGGGAAACTGTTTGAAATGACCCGAAGTGGAGCCATAGACATGAGCAAGAGGAGCTATGAAGAAGAAAACTTCCACTTCTTCCAGATGGGTGACCAGCCCTTAGAGGAGGTTCTGTCAGATGAAGCCAGGGAAGATCCCATTGGATGTGAGGCTTCTGAAGCAGAAGGTGCTATGAGTGCTCCGTGTTTGCAGTTGAAGCCAGATGacgatgatgaagatgatggtGGTCTCTGCAGCGAAACCACAGACACAACAGATTCATCTTTTCCTCAGTCCAAAACAACTGACAATGATCAGACACCGAATACAGAAGTAGTAGCCATGAAATCCGAAACAATAAAGTCTCGGATCCCGATCAAAATGGGCATTTCTGCATCGGCCAAACCCCTAAAGAAAGATTCCCCTGGCCCCGAACAGACAGAAGCTCAATCTGAGAAGAGCGACGGGGATAGCCCCCCAGGTTTGGACTTGGCTTCCTTAGAACCATCCATAACAAACGTCCAGCTCACCTTCTCAACGGTGACTAGATCCGTTTACTCGGAACAGGACGAGGAGTCTTCAGACTCTTCTCCCGAGGAGCAGCACTCAGTGATTGAAATTCCCAAAGTTGACCTAGAGACGGCACCCTCCGCTGAGCAGGCCTCAAAGATCCCAGTCAAGCCTGCATCACCAGCCGTGTCACCAACTGAACCACCTGCCACTGTGCCGTCAGCCCCCTCCCCTGCCCCTCAAAAGGGGGCCgtggaggaggaagtgaaaccCAAATCCAAGATACCGGTTAAGGCAGGTTCGCTTAAGTCCGAGACGGGCCCTGATGTGCCAGTTAGACGTGCAGAATCCCTCAAGGTCGCGGACAGGAAGTGTAAGATACCCGTGAAGCAGGAGCAGAGGAGCAAGTCCGAGACCGACGCCAGTGCCTCAGGAGATTCCAAATCCAAACGCTCTTCCAAAGCGAGGAGCTACTGTGAGGGAGAGTCCACAGCAACGACAGGTAAGGCGACCCTGTTCCGAGCGGAGAGCGAGGAGGCCACGAAACCCAAGACATTCCAGTCCAGACTGCCCGTTAAATCCAAATCTGGCCAGACCTTGCACACGTCCACCCCGGCCAAGGACAACAAGGAGACATTCTTTGAGCTGTACAAGAACTCCATCGAGTTCTTCGAGGAGATCAGCGACGAAGCCTCCAAGCTGGTCGAGAGGCTGACGCAGGCGGAGAACGAGCAGGATGCCGCTTCCGACGATGAGAGCAGCACCCTGGACATATCGGCTGTGGAGAGCGAGCCACTGCTCGAGTCGCAGCTCCACCTCCCCGAAGACGTCTTTGACATGAGACCCATCTGGGATGAGTCCATTGAGACTCAGATGCAACGCATCCCTGATGAAAATGCCCGAGGCCACAGTGAAGATCCACAGGACGAGgtggagaggaaggaggagaggtTAGCTGTCATTGCCGACCACCTTGGGTTCAGCTGGACGGAACTGGCCCGGGAGCTGGACTTCAGCGAGGACCAGATCCACCAAGTCCGTATTGAGAACCCCAAGTCCCTGCAGGACCAGAGCCATGCGCTGCTGAAGCACTGGGGGGAGCGCGACGGGAAGCACGCCACAGAAAGCAGCCTGACTCAGAAACTCACCAAGATCAACCGCATGGACATCGTCCACCTCATCGAAACCACAATCATCAAGTCCAGCCAGGAGCAGTCGTGCCACACCTATGCAGACATCGAGCAGACCATCGCCCTGGACCACAGCGAAGggtTCTCCGCGCTGCACGAGGACATCGACAGCCCCAGGACGGTGCGCCGGTCTGAGAACTCCAAGAAACATCCAGCGCCCGGACAGTCGCCCCCCATGGTGTCAGAGGAGGACATCTCTGTCAGCTTCTCCTCTCCCCATGAGGGCGCCCCGCGGGGAGACGCCGACGTGTCTGTCACCGAGTtcctgagacacacacagaaggaGAAGCTCCAGGCCAACCTGCACAGGGACACGTCACAAACCACTGCACAGCCTCAgGCTTCGGAGGGCACACCCAGACGGGCATCTGAACAGGGGGGAGCAGAGACTCAACAGAGAGGGGCAGCCAATCAAGTAAGTCCTCTAGACATGGTGCAGGGGGCGTGGCTTCTGGAGCTGACCGCCCCCGAGAGAGCACTCCCAGAACCCCCCCCAGAGTCGTACGGGTACAGCCGTGAGTTGGCAGAGAGCACACTGTGGCACGGGCAGGCACCCCCTGAGGTCCCCAGAGCCACCGCAGACAGAGCAGGCAGCCGGCACGGTAGCCCCGAACTCAGTCCCACCTCCCCGGCCGTTGGTCTCAGTCAGCTGTCACCTGACCCGCTCGGGCCCACAGCTGGATTCGGCCAGGTGTCATCCGGATTCATCTCCCATCCCATCGACGGGCCGGTGTCTCCTGATTTCTCCCCCGAAATCGGAATCGGAGGAGTCAACGCAGCCCACCCTGTCTTCGGTGGTCTGACACTTGAATCTGATGAAACTGCTCTTGGGGTCAGTCCAGTGTCCACTGAGCCCATTGGAGTCGCCCCTGAATTCAGTCCAGCGCCACCTGAAGTCGGCACAACCGGCCTCGAATTGGGTCCGATGTTGCAGGAATCCGCACAGAGCTTCCTCGATCTCAGCCCTGTCTCACAAACGTCCATCAAAGCCGAGCCCCCCGCCTCAGATCCCCACCGGACCACCGATGAAACCGGCCAAGTCTCTCTCCCTGAGCGTGGTGAGATTTCACCGGATCTCGAATCGTCTTCCTCTGATTTCAGTGATATCTCGCCCGAATCCCTCAAAGCCTTATTCGAGTTTGGGGTCCGGTTACCTCCACTGCCCCCTGGGCTCAGCTCACCCGTATCGAACAAACCCATCACGCTGTACAGGATGACCTCCGAAGGCGGCGGCGTATTCAGCCAGATGTCACCTGACCTTGACTCGATGACGACTAGATTTAGTCAGATGTCTCCTGAGTGTAGCAGAACGCCCCCAGAGTTCAGCGAGATATTTCCTAAGATTTCGCCCGACTACTTTAAAACCACCTCCTGTGACTTTGGTCAAGTGTCACCTGGATCGGCCAAGCCCATAACCGAGTACAGGTCCATGTCACCACAGCTGCACCAGACCGCCTTTGAGTTCAGCCCTCAAACTCCTGGCAACAAGACTCCCTCTGAAAGCAGCCCAGTCTCCCCCGAATCCATCCCAACGGCCTTTGAGTACAGCCCGTTAACTCCAGGGTTCGGCGTCACCACACCCGCGAGTGCCGACGTCCCCCACCCCGGAGAGCAGCCCCCGGACCGCGCTGAGGACAGCAACAGGAAGCTGGTCTGTGGCCCCCAGGAGCTCGGACTGGACCGAGGTCCTCCCGCCGAGAGCGCCGAGACTGCCAGCTGGGACCGGTCAGCTGAGACGGCTGAGGAAGACTCCCCGACACGCAGACAGCTGAGCCCGGAGTCCGGTCTCTCTCCCCGTGAGATTACCGAGTCCATCCCCGCTTACCGGTACACGACTCCAGTCTACTCGGAGTTCACTCGGCTGTATGAAGGCGCCGACCCTGAATACGCAGAGCCCTACTTCGACACCATGTGGGCCGCCCATTACGCGCATCAGGAGCAAGCCGCACCGGCTGGCAGTGATCCCGGCAAGACGTCGTTCTACCGTAGAGACCTTCCGCTTGTTTTCGGTGAAGCCAAGCCCGCGACCCGTGCCCCGGGGCCCCTGGACACAGACGAAGCAGCCCAAGCTGGCGATGATTCAGACATGAACCCTATAGTGCATGAGCCGGAGGAGGCCCAGGCCCCACCACCCGCTGTGCCGTCTCCCAGGAACGGCAGCTTGACAATCGTGGAGTCCCCCGAGGAGCACCCTGGAAAAGTGACTAAATACCTGGATGATGACCCCCTGGAGAGGGAGATCGTAGCCGAGCTGGGCATGCTGGAGGATAGTTCGGATGATGAGGAGGTGGTAACGACCCGGGTGGTCCGCCGCAGAGTGATCATCCAGGTCACCAGGAAAATCATCCGTAAGTATGTGTCTGCGGATGGCGCCGAGCAGGAGGAGGTGATCATGCAGGGGCCCCCACAGGAGCCTCTGCGTGTGGAGGAAGGGGACGGCTTCTCCAGGGTGGTGAAGAGGACGGTGACCCTGTCGGAGCCTCAGGCGATGGCGACGGGAAGCTCCTCGGAGTTCCAGGTGCAGCCGGTCGAGGGCCGCAAGGTCAGCAAGGTCACCAAGACCACGGTGCTGCAGGGGGAGCGGATGGAGAAGCAGCTGGGCGACCCCTCGCTGGCCACCGGCCTGCCCTCAGCCAAAGACGACTTTGAACAGGCCCTGAGTTATGTGGGCGTCTGTGGAAAGGTTCACCTCCCGCACTTAGCTGAGCAGGAGATTGTGCAGGAGGACGGCTCGGTGATCAAAAGGACGAGCATGCGTAAGGCCAGCTCCCAGCGGAGGACGGTGGTCCGCGGCGCCGAGGGGAAGCAGGTGCACCTGGAGCAGCTGGACGACGCCCCCGAGGCGCTGCGGCACGACGCCCTGCAGCACGACCTGCACCGGCTCCTCCGCCGCCTCTGCAGCGACCAGCCCGAGTGACGCGCCGCGCCCCCCGTGTGCACCGCGGTCCGGTCCGGACCCACCCCCCGCCCCTCCACAGCCCGGCCCGGCGGCGCTGCGGTGGGACACACAGTTCCTCGTTTCATTTCGTTATTTCCCCGCTTTCACTcctctttcatttttgttttttaaagctgtatttGGTTTGTTTCGGTTTTTCCTCTAACTCTTCTCTCCTGTTTGCTAATTTTGTGACCAAAGATAGCATCCTCTGTTGTTTGGGTGACGTAAACAAGTagatctttttcattttccttctttttctgtttctttttgactttttttaatttgttttcctctagTTTTTTTGGCCGCTGTGTTAGAAAACAGCCCCCGGGGGGGTGCAGCGCAACATCCGCTTCCTCAGACCTCTTCCCAAGGACACTTTGAACATTTGTACATAACGGTGAAGTGCTTGGACTCAGATGGTTTATTACACTGCCTCtcatcaacacaacacaacacaacacgaTCACCGATCTGTCTTTCTAGGGTAACACTGTAGTGCCCATATCACTATATTACTCAAGCGTGTGTACAGGCTATTGAAGCACTCAGACCTGCGACGGCTGCTGGAGTGTGTTGTCATTGTGTATCTATAACTGGACGGACGAAGGGCCACATCCAGGGGCCGGGAACCGAGGGCGTGTCGATCGCATAATCGAAAAAGTATTGCaggaaagtgagagagagggattgcTCGCCACGGCCAGCGGAGAAGTGACTGTGGCCCTGAACACGGTcccccgagagagagagagtttgtgctGCACTGACACTCACCATCCGATCACTTGTCTTCGAGCTAGAAAAGTAGGACGCTGCAGTCCAGCCAGGTGTGTCCGCCTTCAGCCATCAGCTCTGCAAGACtatatctttctttctgtctgtctgtctgtcttccttcCGTTCTTTCTCTCCTGCGTGTGGCGTGCTGTGGTTCCCTCTCGTCCCCTCTGCGCTGCATCGGTCCGGTGCTGTCCGCTGCCCTCTGTCCCCGGGACGTCTACGCCGTCCTCCACTGTCTCGTTGTGTACTCGTGTGTCGCTCTCGGCTGCTCTATAACCCCGATCCTGCTTCACAATCTCCCTCGAACCCTCAAGTCTTTGTCCTGCTTGtgatttgactttatttttctcaatttaaaaaaaaaaatagctttcattttcagttgttttcccCTCCAGATTGTAaccataacaaataaataaacagagaaacaaatgaCACAATAGAGAATTTCACTCAGTGATTTCCATCACAGATGCTTTAAACCGGACTGAGAACACGGAGACCCTCGAGAGCCCGGCTCGGCACGAGAGAAGAACCGTCTGCGCTGTGCGTTTCTGTTTGTGTCGCAGTGATACGCTCTCCCACACACAGACTCGCACATGTTGGACGCACACACCGGTCTGAGCGTCTGCAGTGTGAGCCTCAGGTTGTGTATCCAGGTGCGTTTCCACATCGCAGGCTGCGAATGGGAGGCATGTCCTCGGTCACGGTCACAGGATGGAACTTGCTCTCGTGACCTTTCACCCCTCACTCTGCTGAGGTCACTGGCGTGTTTTTACTTCTCTGAGGTCCTCTGCTACGTATTACATCATTCCCATCCTCTCACTTTTTTCACAGTGCGTCCGACTGATGCAAcatctttgtgttgtttgcaaagcctttcagtaacaaaacaaaatgatttatagTAGCCGAATGCCGGTCTGTGTAGGTGTGCCGGGGAGAGAGGCTGgtgtgagagtctgtgtgtcCGGGCTCGTGTCCGTGGGTCCGGGCTCGTGTGCTGATGGCGAGGTTAGGATGaccttctgtttctctctgctgtGTAACTGTTTGACTATATTAGCCGTCAGCTTGTTGACCGAATAGGAGgttcaaagacaaaatgaagCCTTGGTGTTGGGGATGGAAAACTGATAGAGCAGTGtgcgattgtgtgtgtgtagtcagTTGTGCGTTGTCGTGCCTGTGTGTGTCGTAGGGATCAGTGCCGACACTCGACAGCCCCGTTGTTTCCCTGGGGGGGCGAGTGGGACTCGGGGTGCAATGCCTATACCACCATTTTCAGTCTAGAAAAAAGTATGAAACTCATCCAGTTAAACAGCTGCTCAGaccaggggggtgggggggcttgAGAGCCATGTCTTAGATCCCAGACAGTGTCTCACATGTTTGTACTCGTGGCTTAATGTCTGTGGACCCAGAGACTGTCCCCTGAGGGCTGCTGTCGGCCTCTGGATCAAACCTTCTGCATTTCCTCACCGGGCCTGAAACCGTCTGTGGAGCTGGCGATGAGAAACACGGGTGAATGTGGTGTTGCAGGTTTTGCAGTTTTCCCTTCGTTCCCTGTATTCAGTAACTAAAGCGATGCGATGGACACTGTGGCTGTGTTGGTCATGTGATTGGTGTAGGGCCGTGTGACCGGTCAGCAAGGTAACTAGTATCTGGAGCACAAGCCAGGTGATCGTGATGTTCGTACAGCAGAGTGATGTGGCTGTGGCTGGGGCTGGGGCAGATACTGAGACCCCGGGACCGAGTCGCTTATTTACAGCACCTGTATGGAGTGATTGTTGCCCGATCTGGTTCACTGGCCCGTGATGCCCTGCTTTCCCTCTGGCAGCTGCGGGACACAGAGGATGGGGGTTGTGTCTGACTGAGGACATATGGAACAAACAGATATTTAATCTATGGTAGATGATGTGCGAACCTTATACTGAagtttttgcatatttaaaatacacagggATATATTCTACATACATACTCAGCCTGTTATCCATGTACTTATttatatgttcaaaataaatgatgaggTTAATTTATACCATAGGTTCTCAACATATCAAATACATGTATGGATTACAGAACTACTCACGTGATCAAAGGCAGCATGGAGCCAATGTAGCAAATTTAGATGCTAAAACTAAAACTAGTCTGCTGCAAGAGGGGACAAGAGATTGTGCTCCGAAAACACATCCCAGATTAAATATCTAAATGATGTTGCTGTCCAAGAGAAGAGAGTGATTGTTGATTAAGATGCCACCTTTTGTAAGTATGGATGTCTCCATTCTCGGCCCGCTGAGTGCGACTGACGCAGTCCTGCCGACCGCGCCGCGCTGGTGCCGGGCCACACTCACTCAGACTGGCATCAGATCTCCAGGGCCCCGGGCCCCACTGTCTACCAGGGACCCCGGTGCTCCTGATTGGACTCAAGAACGTTTCTCTTCCTCACAACATCCACTCGCATCCCCCGTGTTTAtcaccaaaataaatagatacgttggtttataaaaaaaaaaagtagaagaaGCAGGAAACGAGAGACTtccagtgtttgtgtgctgttgtgtaaATGCTTCCCGAGTTGCGGTTCACTTCCACGCTTCAGAGGCGGTCCTGGCGCCGGGGCGGGCGTCTCTGCGGATGACATCGGGGCAGCACAGAGTACCTGTGCTGTGATTGGCACAGAGTTCCCATGCTGTGGTTGGCACAGAGTCTCCGTGGTGTGATTGGCAGAGTCCCTGTGGTGTGATTGGCACAGAGTTCCCGTGGTGTGGTTGGCACAGAGTTCCCGTGGTGTGGTTGGCACAGAGTTCCTGTGCTGTGATTGGCACAGAGATCCCGTGGTGTGGTTGGCACAGAGTTCCCGTGGTGTGGTTGGCACAGAGTACCCCGTGCTGTGGTTGGCACAGAGTTCCCGTGCTGTGGTTCGCAATGCAGAGCGTATCTATGTAACGACATTCTGGTTTTCACTTCACTCTTTACTTTGATTGTAATcgagaaatttaaaaataacgaGACCTGTGAGCAGTAAACATTTAAGTTGGTGAATCAGCATCTTGTTTCCATGGTGAtaacaattatatacatatatatataaatatctatgaGGGCATGTATTAgttattaaactaattaaaaaaataaacactaacaaTGCATAGCAGCTGCAGTGTGTACATGGctgattgaaataaaatgtacaagtgTTAAATGTC

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118325 lncRNA upstream 71513 32517123 ~ 32535900 (+) True G94858
TU118290 lncRNA upstream 140777 32461298 ~ 32466636 (+) False G94838
TU118234 lncRNA upstream 257050 32347462 ~ 32350363 (+) True G94792
TU118236 lncRNA upstream 257050 32347462 ~ 32350363 (+) False G94792
TU118191 lncRNA upstream 370222 32233771 ~ 32237191 (+) True G94763
TU118392 lncRNA downstream 94140 32746824 ~ 32762583 (+) True G94899
TU118399 lncRNA downstream 137141 32789825 ~ 32793141 (+) False AMCG00018027
TU118400 lncRNA downstream 142071 32794755 ~ 32797498 (+) True G94906
AMCG00018018 mRNA upstream 5919 32594172 ~ 32601494 (+) True AMCG00018018
AMCG00018019 mRNA upstream 14509 32590175 ~ 32592904 (+) True AMCG00018019
AMCG00018011 mRNA upstream 146656 32442543 ~ 32460757 (+) True AMCG00018011
AMCG00018013 mRNA upstream 168407 32429234 ~ 32439006 (+) True AMCG00018013
AMCG00018014 mRNA upstream 178654 32425539 ~ 32428759 (+) True AMCG00018014
AMCG00018027 mRNA downstream 136757 32789441 ~ 32793604 (+) True AMCG00018027
AMCG00018026 mRNA downstream 188339 32841023 ~ 32845300 (+) True AMCG00018026
AMCG00018033 mRNA downstream 260637 32913321 ~ 32914729 (+) True AMCG00018033
AMCG00018034 mRNA downstream 294184 32946868 ~ 32947806 (+) True AMCG00018034
AMCG00018030 mRNA downstream 323247 32975931 ~ 33015403 (+) True AMCG00018030
TU118319 other upstream 5964 32507690 ~ 32601449 (+) True G94857
TU118291 other upstream 142350 32461298 ~ 32465063 (+) True G94838
TU118260 other upstream 196040 32407429 ~ 32411373 (+) False AMCG00018012
TU117593 other upstream 3157066 29433412 ~ 29450347 (+) True G94275
TU117380 other upstream 3963430 28642730 ~ 28643983 (+) False AMCG00017910

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) TU436781 True 785 TUCP 0.54 4 CI01000189 3830627 ~ 3832613 (-)
striped catfish (Pangasianodon hypophthalmus) TU436781 True 227 lncRNA 0.52 2 NC_047620.1 185834 ~ 193914 (-)