RNA id: AMCG00021020



Basic Information


Item Value
RNA id AMCG00021020
length 657
RNA type mRNA
GC content 0.43
exon number 2
gene id AMCG00021020
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41709478 ~ 41710229 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAATTTAAACCTTGTCTTAAATGATGCCTGTCAAAATGTTCCTGAGGTGAACAACCTTTACAACTTTGTGCAAAGATTGTTTGTGTTCTTTAGTGTGAGCATTAAAAGGTGGGAACTTTTGGATTCACACCTCTCCAAAGCTGGCCAGCTAACGCTCAAGAGGCTGTGTACTATGAGATGGGCAGCCAGACACGATGCTATTCATTCGTTGCAGTTCTGTTATGCAGATATAATACAAGCCCTCACTAAAATTGCGCTGCTTTCTGATGCAGCAGTCACAATGAGCGCTCAGAGGCCATTGGACTTAAAAAGGCCATGGAGAAAACGCACAAGTCACACAAAAAAGCACTTTGACGAGCTATGTGAAGATGAGTGCCTTCAAAATGCGGAGGAACATTTTAGGGtgtctgttttctgtcaatACATAGACACTGCAGCTGCTCAAATGACACGCAGATTCACCGGAATGAACGAAGTCgcaaagcaatttgtttttctgtgtccCACTGAGCTTTTGTGTGCCACTGATGAAAACCTCTTTCTCTCAGGAAATGCTTTGGCTACACAGTATAAAGACGACCTATCACCTGAGTTCCCAGCTCAGATCCTATCCTTGAGAAATGCCCTGAGGAGCTCAATCAAGGAAATTGAATGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84155 lncRNA upstream 89869 41619295 ~ 41619609 (+) True G67371
TU84093 lncRNA upstream 201377 41507607 ~ 41508101 (+) True G67322
TU84079 lncRNA upstream 311804 41332266 ~ 41397674 (+) True G67310
TU84078 lncRNA upstream 404257 41304187 ~ 41305221 (+) True G67309
TU84037 lncRNA upstream 670382 41038854 ~ 41039096 (+) True G67272
TU84182 lncRNA downstream 27018 41737247 ~ 41854669 (+) True G67393
TU84188 lncRNA downstream 180442 41890671 ~ 41893979 (+) True G67398
TU84197 lncRNA downstream 274382 41984611 ~ 41985031 (+) True G67405
TU84275 lncRNA downstream 439330 42149559 ~ 42149967 (+) True G67479
TU84316 lncRNA downstream 685496 42395725 ~ 42395996 (+) True G67519
AMCG00021021 mRNA upstream 191 41700865 ~ 41709287 (+) True AMCG00021021
AMCG00021015 mRNA upstream 50687 41657670 ~ 41658791 (+) True AMCG00021015
AMCG00021013 mRNA upstream 78046 41630679 ~ 41631432 (+) True AMCG00021013
AMCG00021009 mRNA upstream 120459 41578384 ~ 41589019 (+) True AMCG00021009
AMCG00021016 mRNA upstream 190633 41459477 ~ 41518845 (+) True AMCG00021016
AMCG00021022 mRNA downstream 1692 41711921 ~ 41740137 (+) True AMCG00021022
AMCG00021018 mRNA downstream 45276 41755505 ~ 41782847 (+) True AMCG00021018
AMCG00021017 mRNA downstream 130802 41841031 ~ 41861878 (+) True AMCG00021017
AMCG00021019 mRNA downstream 184604 41894833 ~ 41934745 (+) True AMCG00021019
AMCG00021023 mRNA downstream 273154 41983383 ~ 42015154 (+) True AMCG00021023
TU84094 other upstream 107365 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 656920 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 1387657 40321113 ~ 40321821 (+) True G67108
TU83200 other upstream 4792042 36914815 ~ 36917436 (+) True G66551
TU83151 other upstream 5452967 36254699 ~ 36256511 (+) True G66506
TU84255 other downstream 342701 42052930 ~ 42053675 (+) True G67459
TU84320 other downstream 715882 42426111 ~ 42465886 (+) True AMCG00021029

Expression Profile