G66551


Basic Information

Item Value
gene id G66551
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36914815 ~ 36917436 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83200
CTGTCACTTATTGAACCACAGTTACATACAGTACAAACAGATGCTGAAAGACTAATAATTACGATACTTTTTATTCAGGCAATGAGATatggacaaaaatatatattagtaaacATTATAATTTCATTACATCTGTGTAAGTTTCCactttacaaatattaatgacattaaaaaagaaGGGTTCTCGTTTCTTTTTTGCgtataaaacatacacagtcAGATGGCGGCAATTCAAGAATGACGGGGAGGGAAGAAAAGGATGGATTAGTCACAGCAAAAGAACAGTATGCTCTCTGTGTTTTCAACGCGCTCTCTAGACTGATGTCGTTTTGGCAGTCGATTACAGCGAAAATGATGCGTTGCAAGGCTGATGTGCTCGGACAACTGGAGTGCATTAAAGGTCCATTTTCTATGGTCGGAGTATTGCTGGAGTGATGTCAGTGTAGACACTGCCTCGTGGTGCACAACCGTCTCCCTGCTCAGTTCTCTGATACAGGGAACGGTCAACGATGGCAGTTTGGGATTGCACCTAATTTTGGGGGCCGGTCCAAACGCCACTGTGAATCTGTCTATGTCAGGATTTTAAACTTAAAAGCCCGGGGGAAAAGAAGGAGCAAACACACCCTTGGACTCAatgtacatataaaaaaatttaaataataaaaaaagagttaaaaacatgtctctgtgtctccctgaAATGTCAATGCCAACAACAAGACGATAGGTGCTGTTCTGCTCTGACCCTCCCCCCCGGAGTCcgtgaaaatattttaaaaactttgtTCATTTTACAAGTATACCTGTTCTACCAGTTCTTTGGAGATTAAGTGCTCACaataatgagaagaagaaaaataacatacaatatatCCTGCGaataacaatatgtatttgatgAAATAATGAGCAATTAACAGCAATTTAATGTATAATCTTAatctttttcttccttcctcTTTAGTCGCTTGCTTATGCCAAGGTTTGTGGACAGAAAAGCTAGTgcagtaaatgtattttcaaagttTATGTGACAGCAAATTATACCCATTGAAATGCTGGTGGAGTATATGGATAAAACAGTATTGGTGGCGAGAACAGTAATTTCTCTGGCATTTGGATGGGCTGAAAGCATTTGCTGAAATCACACGGAcgacaaatttaaaataatatcgaaaacaaaaacaaaaccaattctTTTTTGCCATCTCATACAACGTCTCATATAATGTACTGATTTCAGTGGTGAAAACAGTGTCCTCCGTCTCTGAGACTGGTTTCTGTAGCAAAGCGAATGGCAGTGACAAAGCGGCATCTCTGGAAATAAACGGCAGCaatgtacaaacacaatatttcaTACATCACACAGCTAATACAACATCTCTTGCTGCCTTGAGGGGGTGTGTTTAAGTCAAAAACAGCCCCGACACAACAATGGGAGACATAAGCTCAgatcccccccttcccctccatAAGCAATTCTCAGAAAACGCATCAGAGCAACAAAAAGCACAACCTGTGACTTCCAATGGAGGTCACTGTAATTGCTCAGCAGCTGCCATGAAGTATAATCTGCAACTGGGCAAACAAACTGAGACTTACATTGTGTTCTACCCATTTCAAAAGCTCTCCGCAATCCCATTGACAGCCAAGCCAAAGCGCTTGGTCCACAAGggccaagaaaacaaaacagaaattaaagcaaatcCTTCTATGTGCTTGTATGTACACTTCAAACCTGCAGACGACAGGctcaaaaaaataattggtcacttttcattttctttttctcctctcctcacTGAAATGGTAGCAGCAATTTGGTTGCGTAAACATTTAGGGTCAGGCTTTCACCGTGCTGTGGGGAAAGAAGGGAAGGGAGGGGATCCACTTCCCAGTATAGGTCAGGTTTGATTCATTCCCAGCCTCTCTAATCTCTGGAAAAGCCAATCCCAATCTTGCCTGGTATGTCAGCTGACGGCGACACCAtaacaactaaaaacaacagaaagaaagTATGGTGTGCATACCAACGATGGCGTGGCACAAGCACGCAGATGGCAACATAGTCCTGCCACATTTTGCACTCGTATCGTACATATTTCCAGCAATTCCCCCTGCTGCACTGAATGCATGACGGCCACAAGGAAGGGGAGGCTACttgggaaaagaaaatgatgtttttagtggatttattattttttttctccttctttccaGTCTTCTTTCCAACGACTGTGGCTGAGTGAGAGAGCGCAGGGTGTGCAGGCCAGATGATGGACTTTATATACGAGCAATCTGCAGCGAGGGTGTGATCCCTTTCCTTTTTGAATGCAATGCCTAATTTAGCCAGCAAAGAGGGGCAGATCTCATTCTACTGGGCGTGGCTGGTCACTAGGTAAGGCTAGGTGCTGTTAGCTGGCACATGCACAGTGTTGAAGAAGGGGTTGGTGGGAAGGGTGGCGGGGATGGAGGGGTTAAGGAGTTTGGGCCTTGGGGGCGGGCCGTCCTGGAGGTTTAGTCCGTTTTGCCCAGTTTGGCGATCAGCTCGTCGCAGATCTTGGTGAGCTCCTCGATTTCTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83200 True 2585 TUCP 0.43 2 36914815 36917436

Neighbor

gene id symbol gene type direction distance location
AMCG00020914 NA coding upstream 45237 36851495 ~ 36869578 (+)
AMCG00020909 mak16 coding upstream 673595 36234933 ~ 36241220 (+)
AMCG00020910 rnf122 coding upstream 688466 36205330 ~ 36226349 (+)
AMCG00020908 NA coding upstream 710955 36196447 ~ 36203860 (+)
AMCG00020907 dusp26,LOC102218034,LOC106904628 coding upstream 719972 36187749 ~ 36194843 (+)
AMCG00020919 NA coding downstream 130206 37047642 ~ 37058036 (+)
AMCG00020925 NA coding downstream 176850 37094286 ~ 37112090 (+)
AMCG00020926 NA coding downstream 241216 37158652 ~ 37165302 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding downstream 266228 37183664 ~ 37185928 (+)
AMCG00020931 loxl2,LOC106580522 coding downstream 286552 37203988 ~ 37226869 (+)
G66528 NA non-coding upstream 108238 36806320 ~ 36806577 (+)
G66524 NA non-coding upstream 189686 36724894 ~ 36725129 (+)
G66395 NA non-coding upstream 840394 36004619 ~ 36074421 (+)
G66342 NA non-coding upstream 1057787 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 1097036 35813743 ~ 35817779 (+)
G66602 NA non-coding downstream 156243 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 371078 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 383812 37301248 ~ 37301598 (+)
G66701 NA non-coding downstream 386613 37304049 ~ 37309335 (+)
G66739 NA non-coding downstream 577685 37495121 ~ 37495381 (+)
G66506 NA other upstream 658304 36254699 ~ 36256511 (+)
G66362 NA other upstream 1006413 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1164369 35747156 ~ 35750446 (+)
G66149 NA other upstream 1749830 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 1765397 35147603 ~ 35149418 (+)
AMCG00020942 NA other downstream 649600 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 1199626 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 3403677 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 3638530 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 4134036 41051472 ~ 41062527 (+)

Expression


Co-expression Network