G66701


Basic Information

Item Value
gene id G66701
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37304049 ~ 37309335 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU83369
GGCCCACTCTAAACAATgacattactttttttgtgtgtgcaaataCATTATGTACAATTCTTATAAATATGGCatcttcgtttttttttttgttaaaaaagaatataaagaaaaatgtgcacaaTACAGCAGGTAAAATGGGGCTTCTGAAAATGAAGCAGAGtccactttaaattatttacgaaagaaaagaaagaaaaacatttttacagaaataCTAAAATCGCAAACAGCAGTTGATTCCACCCGTGTATTTTGCTAGTGGGTCACAATGGTTCTTGTTCTTGTAGTACTTGATTGTTCTCAATTGAACACCGAGGTTGAAGCAGGAGGTTGCACAGACCTATAGACCTACAGGCGTCAGACCTGCAGGACAAGACAGAGGACAACTACAGTCAATCAATTGGGTTTCTATACCGAGTTCAGTGTGGTTACAATTCAGATTGCCTTTTCAGCACAGAGAACAAATTcaaatacacagataaataaactGGCTAATTTTCAGCCTGTATTTCTGCTGTCCCTACCCTgcttttaaagctgtaattagcatCGGTAACCCATGTAACTTTCTCAATTATTACACAGAACTAATGACGGATCACATATTCATTAATCTTTTTTCCATTACAAGGATGCTCTTCAAACTGCAATCTCATGATACAGAGCAATGTACCTGCTGGAGTAAGTAACTTGTCAGCAAGTGTGCGGTCATGAATTTCTATGAGTGATAAGATTCATTGAAcacaattgatttttaaaaatatatgtattttagtagtctgcatattaaaaacatgtggTGTATTGAAAAATTggcacttaaaaatataaatccaaGTATGGGGCCCAACATACACTTTGAGGAGAGCTCCTTCTGAGCTGAATCACTCCAATTGTAACTGACTAGTTAATTACTCTAAACGTGCTCAATATCCATGGTTTAAACTGTGTCTTTCTAATGCAAATTGattaataaaagtataatttgtCATCAGCGCTCTAATTACATTTAGAAACAGACATGGATGAATAACAACAAAGTGTAGCTTTAAGGATAGGTAGGGAGAGCAGAAACATTGGTAATAAGATAAGCAAGCCTATAGATAATTGGACTTATTCTTCGCCTCAGCATCCACCCTTTCTTGATCTGAAATGAAACCACAGTCTGTATCTAACAGGTCAAAGATCTGCTGATGCTGCAAGACTAGAAGCACCGAAGACCTCACAGTTATGGGGCACTTTGAGACCGAACTCCTTGTTAGGCAGACTAAATTGTAACACTAACAAATTAATTGTAACAAATATATTGAGCAGCAATGGTCATTTACATTCCACATGGCAGTGTCAAAATACAAGTCTTcaatagaacaaaaacaaacaccccaAAACATTTTTCCTTCTGTTGTTACGCAGATACTGAATTTGCAATCTCCTGTTCACTAATATAATCATGCTAATTTGCACACTGAAGTAAGAATTGGAGCTGTTCGGTAACATTTCAGAGCTGCCGATTACGGGGATAGTTATTAACTGCAGTCGCTGTTCGATGCAAAAACAGATCAAAAAGACTGAAGATGCCAAAAGCTTGTGCATTAGGCGGTGAAGTTAAAGAGATGAATatgacaaaacacaacaacaatataaaggTTAAGGCTCTTCTATGTCAAAGGTTCCAATCTGCTCATGTTGGAAGTGCACAGAATCTATAACCTGGTTTTCTAGATGTCCTGGATATTAGAAAGGTCTGCCTGTGAATGTCACCGAGAGGCCGTGCAACGCTCTGCACTCGGCAGTAACTTccccacctacacacacacacattcacaagaCTATGAAATGACCGAAAAACACATCCTGGCCCCCTCATCCCATTGCTCTCTCTTAAGATGCATTAGGCCAGGGCTGCTATGTGAATTTCTGGCTTACAGGCACTACACATCAGTCCTGGCATTGTGAAACATGCCATCTTTCCAGGGCTGGGATGAAATCAAATCTTTCACCCACCCACtattagaaaactacagaactgtactttGTTGTGGCTGCATTTGTGTTGCTACTTCCtgttaatcataaatgtaacagctatgatgtacagctttgtagtttgctattggCGTGGTCAAAGATTTGAATTAATCCCACCCTAGGTCTCTGAGTTTGTAATTGACTACAATTAAAACCTAACTGTAGGTTACACCTGTGCCACTGTTTCTGTACTATTGAATTAGTGGATGATCAATTACTATGCAAATGCACGGTCATACTCAGTATCACAGTAAAATATGATCCATTGTGTATCAGGATATTactaatacaaacacacacatttccattaCTTTCAGTGCCATTCTAATGAGGGCAAAAGGACTCTGATTTTAACAGAGCACAATCTCACTGGAAATGGATCTTCAATTGCAGCTCCAAATACTGCAGTTTGGAACAAATTTCAAACAGCTTGGACACCAGGCCTACATGAGAGACTGGCTTTCTAGTTTAACTGACCAGTGTTGCTCTGTGAATAATTGGCAAAAATTGACCCAAGTAGATCTGatattagagaaaaaaaaaaagcactttaacAGGAAGTACAAATACCGAAgcatacaaaatgattgaaGGGAAAACAGGATTGGAGCAACATGCAACCACAACAGATAAGAGTCTCTAAAATAGATCAGTCTCATACATAAAAGGCTGTTCCTTTCCTACTGTGAAAGATTACATTGTAGAAGCACACCTTCCAATTTACTTTATATGATCACATTGTGATTGTAATCTCAATGTTTTTTTGGGTGTAGgttcataataaatacataaatatatgaagAAATTACTTTAAAACTGACTTCCAAGCTTCTGCCCCAATTTTCTCTCAGGCAAAAATAAACCAACGCATGGAAAGCAAAAGCCTTTTTTTCCAGTATCCTAATTATGTtagaagtttaaaaaacaaacaaccgccccccccaaaaaaaaacattaaaaacaattttttaattcacatcAGGCACGTATGAACACAGAAATATACCTGTCGACCATATATTaatttttagtattattttttatttggttttgtttatttatattcattctGTAGGTCAACATTTACATCAATAGGATTTGCATTTGAGGATATTTTATACCATCTGCCAGTAATTTGTATATTGATTACTTAATGATTTTTTCTGGTTTCTGGACTGCAGACCTAGTCGTTAGGCTGACTGAATTAATAGGTCAAATTGTCATGGTCTTAAGGGGAGCACATACCCCAAGACTGCTGTGACCCCAAATCATGAGAAGAGCGCAAAACATTTACAAGATCCGGACTGTCAACAACAGCAATGTGTGTTACAGAAGGGGGCGGCCCGGGAAGACTGCTAtaagggaaaaacaacaactcttaGTCCAGAACTAAactgagtgtgtgagtgttgatACTTTAATATGCAAGATTATAGAAtaaattcttaatttattttggccATGAATTCAGAGATGTTCTCTCGGTCACAAGGATAGAGGAGGTCATGATATGTAAAACTAATTGTTAGTGCTTTCGTACAACTGTAACTGGATAAAATATAACTGAGAAGTTTAACCTTTAAATGCTGGTGTGAATGTACCTTTCACTGTAGCACTGAACGCCCCACTTGAACTCCTCGACCAGGAAGCGGATTCTACATGATCAGTTAAGCCAGATCCTCTTCACAGCTGCAAACCCTGAAGAAATCAGCGGCTCCTCCTCACTCAGGTATAACAAACAACCCTACAGAGAAGAACTGgtctactgtttttttttgttatttcataaCTGTTCAGTACTTAATGGATTCAATTCAGTTGCTTAATTTGTCAAAGGTATCATCTACCCAAGATATTCAGGGGTTGATTATTTAGAAACCTATACAACCTGCAGGATTGTACTACTGGAGTTggatattgaaaaTGTAAATCAAGTTTCCAACAGCCACCCTCAGAGTGCTTCCTGCTCCTTTCTTGTTCAAAAAGTGCACAACTCAGTGCTGTAATAAATGAGAACAATGGTATCAAAACCACACGCATGTCGTTAACCAAACTTCAAGTATCTGGGACCAGAACACAGGATTGTCTGTAGACCACTTAAGGAAGCATTGCAAGATCAGTGACAATGCTGCCAATTTAATACTACTTTCATAATTGAGATTTCAGGaataagtattaatttaagaCATTGCTTCTATCCATTATGAAATTCCCCAACGAAGTGAATGCTGTGCCGAGTTTGCCATCCTTCACCAGTGTCCCACGAAGTTAATCAGCAGTTCCTCTCCACTGACACTCAGACAAAGCTTGATTCACCCACTGACTGGAGAGAAATACCAAACCATTGATACAGTtcacaactgaaaaacatatcTTCTGAACTTAGAAGCTTGACATAGTTTCTTGGCTTTGCTGACTTGTCCGTACAAAGGTTGACATCTTTCGACTGGatgaaaaactaataaataggcAATAGAATTTTTTTTACTGACaataaaagaagcaaaaaaaaaaaaaatcacattgctTATTCAGCAGAAGTACAGGATCCCAGTTCTTCATAGTAGTCCTACTCCCACCCACCTGGGCGGAGCATCTCGTTGACCTCGCGGTTAACAGCCCCTACTGAACTCCCCGGACTAGAGCAGCAACTGTTGGCCGATCTTGGAGAAACAAGCCTGGACTCTTCATGGGAAGCTTGCGTTTCTTCAGATGGGATTCCTGAAACTGGGAACCACCTCTGAAATTAGCTGCAATTTCCCTCGTTCCCACAGCCCGAATCCAAGGCTCTCATGATCGACCAGGGATGAGACGACAATCAGAGCTTCCTGTGGGGCAGCCTCAGAGAGTGATGGGGATTGTGGGAGAGTTCCGCCCCTCTTCCAGCCACATGGCGgccgaggaagaggaggaggtggagattgaggagagggaggggaggctGCGCTGCATGCGCCGGTGGATCCTGCGCAGACGGAGAAGGTAGAGCAGGATGGAGAGCAGCACCACCAGGAAGCAGGCCAGGAAAAGGTAGTGATTGTTGACGAAGGTGAAACTACCTCTCCAGTGAGAGTGCGCCCCCTTCAGGATCTCCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83369 True 5129 lncRNA 0.39 2 37304049 37309335

Neighbor

gene id symbol gene type direction distance location
AMCG00020931 loxl2,LOC106580522 coding upstream 77180 37203988 ~ 37226869 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding upstream 118121 37183664 ~ 37185928 (+)
AMCG00020926 NA coding upstream 138747 37158652 ~ 37165302 (+)
AMCG00020925 NA coding upstream 191959 37094286 ~ 37112090 (+)
AMCG00020919 NA coding upstream 246013 37047642 ~ 37058036 (+)
AMCG00020941 NA coding downstream 319989 37629324 ~ 37630094 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding downstream 360627 37669962 ~ 37685496 (+)
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding downstream 403664 37712999 ~ 37717080 (+)
AMCG00020946 anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128 coding downstream 596936 37906271 ~ 37922454 (+)
AMCG00020951 NA coding downstream 721393 38030728 ~ 38031966 (+)
G66700 NA non-coding upstream 2451 37301248 ~ 37301598 (+)
G66696 NA non-coding upstream 15208 37288514 ~ 37288841 (+)
G66602 NA non-coding upstream 229415 37073679 ~ 37074634 (+)
G66528 NA non-coding upstream 497472 36806320 ~ 36806577 (+)
G66524 NA non-coding upstream 578920 36724894 ~ 36725129 (+)
G66739 NA non-coding downstream 185786 37495121 ~ 37495381 (+)
G66780 NA non-coding downstream 341094 37650429 ~ 37650698 (+)
G66784 NA non-coding downstream 428397 37737732 ~ 37739188 (+)
G66801 NA non-coding downstream 527767 37837102 ~ 37862332 (+)
G66826 NA non-coding downstream 665468 37974803 ~ 38065665 (+)
G66551 NA other upstream 386613 36914815 ~ 36917436 (+)
G66506 NA other upstream 1047538 36254699 ~ 36256511 (+)
G66362 NA other upstream 1395647 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1553603 35747156 ~ 35750446 (+)
G66149 NA other upstream 2139064 35163813 ~ 35164985 (+)
AMCG00020942 NA other downstream 257701 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 807727 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 3011778 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 3246631 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3742137 41051472 ~ 41062527 (+)

Expression


Co-expression Network