AMCG00020926


Basic Information

Item Value
gene id AMCG00020926
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37158652 ~ 37165302 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020926
ATGAGGAAGCAGTCTCAAATTTCAGTTCCAGTCACCTGCCTCTCTCTGCGCTGGTGCTCCAGTATGAGACCACTACTCCTCTTCTATGTGTTGtacctggtgtgtgtgtgcctgggGGTGCTGTGCGTGGCATTCGTCTCCTACTGGAACCACCATTGGCGCGGGGGGTTTGCTTGGGATGGCTCCGGGCTGCAGTTTAACTGGCATCCCGTGCTGATGGTGACTGGCCTGGTTGTGTTGTATGGGAATGCGGCTGTGCTGTACCGAATCCCCCTGACCTGGGGGCAGAATAAGCTGCCCTGGAAGTTGCTGCACGCTGTGCTGATGTTCATGGCCCTAATCATGTCCATAGTAGGCCTCTGCGCTGTCTTTGACTTCCACAACAAGGGTGGTACCCCCAATGTCTACTCGCTGCACAGCTGGCTGGGGATCTCCACAGTGGTGCTCTTCACTGCGCAGTGGGCTCTGGGCCTAGGTGTGTTCCTGCTGCCCTACTCTCCAGTAGAGCTGCGCAAATTGGTCAAGCCGGTGCACGTGTGGATGGGCAGTGCCATCTTCATCCTGAGCATTGTGTCCTGCATCTCCGGTATCAACGAGAAGCTCTTCTTCTCTCTGAAAGGGGGCAGCAATGTGACGAAGCCATACTCGGCCCTGCCCCCAGAGGCAGTCTTTGCCAACTCATTGGGCGTCTTGATCGTTGCCTTTGGACTGGTCGTCTTGAAGATCCTGTCCAATCAGACGTGGGAGAGGCCGGAGGCGGGCCAAGTGGACGGGAGCTCTCGACCGCTGCTACATGACGAGAACTGATATTTGCAGAGAATTAAGTTTCCTTTGAAGGCCAACACCAGGATGTGGGAGTGAGTGTAGCTGGCCTAGGGCAACAATGAGGAGTTGGCACAGTCCCCACACAGGTGCTGCTTCTAGATCAGTGATGCTAAATGGAAAAACCCTGCTTtcacaaaaattataattataatttatatttataggaGCTGATGGGCAAATATTTCATCAATATACAGAATGGAGAAATGTGTTCGTCATTATCGGTATTAAAGAATCAGAACATACATTCCCCTTTCAAATTGCATTCCgcctgtaagtgtgtgtgtgtgtgtgtgtgtgtaatattttatatcattatatatatatatttgcgtGTGTGTTTCAATGGCTAAAACTGCATTGGCTGACAGCTGTGAGCTACTGCTGGTGAGGTTGATGTGATTAAGCAAACAAAGACTGCAGGAATGTTAAATGAATTTCTGaatgttaaataaaagtattttcattaAAGGTTTGAACTGTCCTGCTGTTCAAACATGCTCAGAAATCGATTtcaacatttgtttgttgtgtggtgtaccacattatattaaaatcacatttaggGTACAATTGGAAATTATGTATCTGCCTAGTTGttagcatttaatttcaaaattttATATGATGATCTGcgattaataaaacatttacccTGGATTGCCATTGAATAGTCAACTGATGCACTGGGCCCTTTTGTGTGTTTAAGTTCTGTAATTTCTCATCCATCCTTAATGATTTTCAGCAACCTATCTAttcttttgttattctgttCCTGATTTTTGGTTTTGAGATTCTGTTTTATAGCCATGCCACAAAGTTTTATATCCTACTTTCACATGATGTACCCTTTGTATAATAGGCAATGTGATTCCCATCCTGTTGAACAGCATCCAAAGGTAGCAGGAGTTAGCAGTCTACCAAAGTGgttatcttttgtttttccctaaACATGAGAAATGTTGACTCGAAAGCTTTCTTGTATATATCAAAGTGGCAGCATCCATCTAGAGAATATTTGGAATTGGGAAATTGGACAGCTTGGGAAATATCAAATCCatccagcccccccacccccttt

Function

GO: NA

KEGG:

id description
K16295 CYB561A3, CYBASC3; lysosomal membrane ascorbate-dependent ferrireductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020926 True 1906 mRNA 0.45 6 37158652 37165302

Neighbor

gene id symbol gene type direction distance location
AMCG00020925 NA coding upstream 46562 37094286 ~ 37112090 (+)
AMCG00020919 NA coding upstream 100616 37047642 ~ 37058036 (+)
AMCG00020914 NA coding upstream 289074 36851495 ~ 36869578 (+)
AMCG00020909 mak16 coding upstream 917432 36234933 ~ 36241220 (+)
AMCG00020910 rnf122 coding upstream 932303 36205330 ~ 36226349 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding downstream 18362 37183664 ~ 37185928 (+)
AMCG00020931 loxl2,LOC106580522 coding downstream 38686 37203988 ~ 37226869 (+)
AMCG00020941 NA coding downstream 464022 37629324 ~ 37630094 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding downstream 504660 37669962 ~ 37685496 (+)
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding downstream 547697 37712999 ~ 37717080 (+)
G66602 NA non-coding upstream 84018 37073679 ~ 37074634 (+)
G66528 NA non-coding upstream 352075 36806320 ~ 36806577 (+)
G66524 NA non-coding upstream 433523 36724894 ~ 36725129 (+)
G66395 NA non-coding upstream 1084231 36004619 ~ 36074421 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 1340873 35813743 ~ 35817779 (+)
G66696 NA non-coding downstream 123212 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 135946 37301248 ~ 37301598 (+)
G66701 NA non-coding downstream 138747 37304049 ~ 37309335 (+)
G66739 NA non-coding downstream 329819 37495121 ~ 37495381 (+)
G66780 NA non-coding downstream 485127 37650429 ~ 37650698 (+)
G66551 NA other upstream 241216 36914815 ~ 36917436 (+)
G66506 NA other upstream 902141 36254699 ~ 36256511 (+)
G66362 NA other upstream 1250250 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1408206 35747156 ~ 35750446 (+)
G66149 NA other upstream 1993667 35163813 ~ 35164985 (+)
AMCG00020942 NA other downstream 401734 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 951760 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 3155811 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 3390664 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3886170 41051472 ~ 41062527 (+)

Expression


Co-expression Network