AMCG00020907 (dusp26,LOC102218034,LOC106904628)


Basic Information

Item Value
gene id AMCG00020907
gene name dusp26,LOC102218034,LOC106904628
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36187749 ~ 36194843 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020907
gtcagCAGAAAGTAATGTTCCCAGGATCAAGTGTCTCCAATGGCGTTTATGTCAAGATTCTCCCGGAGCAGCTCAAGGTCTCCCAACAGAAAGGACTCGGACCGCAGCTCCCCTGTCCTGTCGGTCTGTGAACTGGAGCGGCTGCTGTACACTGGGAAGATCGCCTGCAACCATGCCGACGAAGTATGGCCCGGACTGTACATTGGCGACCAGGATATAGCCGCTGACCGACGTGAGCTGACGAAGCTGGGGATTACCCACATCCTGAACTGCGCTCACACGAAGTGGCGAGGCGGCGCGGAGCACTACGAGGGCATGAACATCACCTACCATGGCATCGAGGCGCATGACTCGCCCACCTTTGACATGAGCGTCAACTTCTATCCCGCGGCCGAGTTCATCCACAAAGCCCTGAACAGCGGAGGGAAAATTCTGGTCCACTGCGCGGTGGGAGTCAGTCGTTCTGCCACCCTGGTGCTGGCCTACCTCATGATCCGCCAGAACATGACCCTGGTGGAGGCCATCAAGACTGTGAAGGACCACCGTGGCATCATCCCCAACCGCGGCTTCCTCCGGCAACTCAACGGGCTGGACGGCATCCTCAGAGACAGCCGCAAGACCTGAGAGGAGGCCGTAGTACAGGCTAAAGAATACTATCTTGAGAAAATCTtgacctgctctctctctctctctctctctctctctctctctctctctctctctccctccttatttattttgctttgcttttgaaagaaatgcatttataataaGCAGTCAGGTCTTTGTAGCCTAGCTAGGATCTGGAGCATCCTTAACATTTCAAAGGTGCTTTACGAGTCAATGTTTTGGTCCCCAACCCTGGTGTCAGAGGACCACGGtgtctgctgtatttattttcagccgagctctcaattgTTTTCAGCTCTTAAACAGATGGAGGTTGTGCAATAGCTCAGAGTGGAAAGCAGGAGACACAGGGACTCCTCTGAGACCACGGTTGGGAACCATGACTCTGGAAAATGTTCCTACTGTTGTTGCTcagatctatttttattttcattcgcAAATGATTCTGATTACTGATCCGCCACTGCCAAGAGCTCGTGTCAATACTGACGAGATTAAGAGGATAACTTGCCGTGCATAAGTTGCTCCTCATTCCATCAGAAAAGAGGAAAGAGCTGTCAAATTGCCTGGATTGTTGTCGACGCTCCTGTGCTTACATTTGTACATCTCAGCTTCGTAACAAGGTGTGGACTCAATCTAAGGTATAGCCACCATCACTTAACGGGGAGCAGGGACCTCGTCCTCAAATACTGAAAACATCCAACAGCATTCCTGAGATTTCAGTTTCCCAAGACGCCCCTGTTGCCCCACTACCAGCCTTGATTGGCATATCAGAGATTGAACCCTCTCTGTTAcagttttaaagacatttttccTTATATAGAACTATGACtataaaaaaatgcagagaTGACCAGGAGGGAAGTTTTTGATAAGCGAAAAAACAATTCATACAAATTAAAGCAACGAACGTAGAGCAAAATATCCAGTTTTCCTAAAACATACCTCAAGTACCTTGCCATTTTCTGGCCAGATCTGagtttccttatttatttttctattttatctaCTTCTCTTCTTAAAATCTCCAAGATATTGAGATAATATTTTGTAGCGCAGAGCTGTGGCCAGGAGAGAGGCCGCTCTTTTCCAATGTAGCAACTTTGTAGATAGACGATTAGCCTTAGGAGTTACATAGTAACCAGTGATTGTACCTTGTTGTCCAGTCCAATGTAgaagtcttttctttttgtggtgTAGGCAGAGTCTGATCCAGCCTTGCAGGTGGGAGAGAATTGGCAACGAATTAAACTGGCTAGTACCCAGATAGGCAGCACACGTCGAAAAAAGACCAGTTGATTATGTGTGGTGCTGCAGTTCAGTTGgcatgtgttttcatttacgtTCCTGTTGACTGAGTTAAATGGGAGCTCGGGAGTAGTTCAGAAAATGTTGCCCTCTTTCTCTTAACTTGTTGAAAGTCCCGGCTCCCAGGACAGAAATTAAGTGACTCTTCaagtattaaaaatgatttgaattTCATCCAAGGAGACAGTATTTTCCCTGCCATAGTCCAGTGTAGTAAACAAAACTATCGTCCTGTACAGTGTCTTTGTATTGTAGTTGGTTACGTTCTTTCTATTACACAAACCCACTGTTATATAAATGAATGTTTCTTCTAACTTCCCCAGGGAATTTTCCCGTGAGGCACCAATTGGGATAGATTGATCCGGGCACGTGTGATTTGAAACGGTGgcatcagatttaaaaataaataaataaatctgcctTGGTTAATGCCAAGACTGTGCAATATTGTGCAAGAGATATGTAAAAGTGCAGATTGGCACTTTTCCGAATGATCGGGGAAAATTGTGCTCTGTGGGTGTCGCtggattttctgttttttgaaaTCCAGTTTGAAAAGCAGTTTGGTCAGGGAATTTCATTAGCTTGTGGAATGAGGAAACCGAAGGCTACCTTTCGCAGTCGAAATCAGTGTGTCTCTTGTCAATCCTGTCTCAAATCCGTGCATTTTTTTCTGCTGGATCTTAGAAAACAACgactttaaaatgtcttatttttttacattaaaccCATCTCTATCCTGCATTTAAAGAGatgtattttggtttaaaatgtgGATTTAGAGTTTTAGAACATTTAGTGGGTTTGGAGTTGAAAGTTTGGAGCTGGTTCTTTTTGTAGCATTAACACTGCCTTTCCTACAAGTCCACAATGAACCACTATCCGTGCATCTTGGAAGCATCTAAAACCTCTTACGCATAAACTGCCAGTACATGTACTGTCTCTCTATGGCTTTGCAGAATCTGTTCCCAGAATTCTCTCCACAGCTGAAATACACTGGCATTTGTGGTGACTCCAGAGGGTTAAATGGTGTATTTTTgcattcacttttttatattgttatttagtttttataccTGGTCACTGCCAACACTGtgaaaaacacactgacacaggggGATGTTATTTTTCAAGGCAGGGTCTGCGTTTCTAGTGGTCAAAGCAGAGCTGGCTATTTCAGTCAAAGGGGTGTGTTTCTGTCAATGCCTTCGCCACACTTCCTCTGAAGAGCGAGCTGTTAGTCTTTCCACTTGACTGGCTACCGAGAGGAGGAGTGAACCTTGATCCCAGTGAAGGGCCTTGCAAAATAACTGACAGACGTTTTGTGGGTCGGAAAGCTGTCTGTGAATCAGAAGATTACTAATTTAGTCTGTAAATCGCAGCCTGCAGTATTAACATAAGAATAATTCTAACCAGTTATTTTCCCTCTCTGCCTTTTACTACAGTTTTCCTCTAAGTAGACTGATTTACCTTACCTTTTCACTGTGCTTGACTGTGCTAAACTAGGTTAAGACAGTGATATACCTATACCAGAATAAGCATATGATGTAGATTATGCTAAATTAGGCACCACAGAGTCTAGTGTAGGACAGTAAGCAAAATCAAAGAGGCAAACTGTGGGAAAAGGATTATATCTGACGAAAGAGGCATCATAAAGACCATGTGCTTTTCTTATATGAACTATAAATAGATGATAGGGTGGTTCTTTAAGATTGTGGGTCTAATGCCTTCAAAGCACCTTGTgattttacaagaaaacaaatccgTATAGTATTGTGAGTTAATGGAGACATTCATCTTACAAATTATGAGAGTGGgaggaaactgaaaaaaataagatcacAGACAGTGACTGGAAAGTCAACAAACAGGTTGCTGTGTTCTTGTGAAAGCTTACAGATATAGGATCCGGAACATACGTGCAAAGCTATTCAATCACTctagaattaaataaaagaggTCTCATTCATTTAAAGAAGTATTAATCCAGCAGGATCGtagtcatttattgtatttttatttttttaattgtgtgtacaAATGAGACTGGTGCAGATTTAAAATGGCTGCCTGGATTTGATGTTTACCACGTATTTACAGGTGTCTGTGTACCCGTATATACAGTGTACAGGGTGTTGATTAGGTCACAGGGTGGAGTTGGAGGTTATGAAAAagcttacttacttacttactatCCAAGCTATCCACTGCGGGGGAGCGTACAACACCATTACCGTGCAGTTGTATCACTTACATGCAGTATTGTATGGCAGGCCATTTAGATATCATTAATCACTAATATGATTATGGATATCAACAATTCTGTTTTTgaaattagaaatacatttgttgataACAGCAATTGTCACATTTTATATCaagaaatacaattgctgatattaaaaatacaatttttgcaattgttGATAAAagcaattctgtttttaatatcaaaaaatatatttctgatatcaaCAATGTGAGACAATTATTGATACCAATTTgatgattaaatgttaaaatggcttGCCATAATATTGAGGTATTTATCACTGAGTATCTGAGGAAGAAAAAGAGCTGCAGTAACACGCGTGAAGATAATGTGAATTCAGACTTCAGTAATGGAACCATCATTTCTAGCACAAAAGAAGACTCCCTTGAAAAAAGCACCCCATCTTTGGCCCTGACTACCACCCTGTGACTCTactgcttgtgtgtgtcttttgaaAGTagatgtgtttcagtgtttcctGGCTATTGTTAGTAAACTTCTGTgccatttcagttttcagtttcattacaGTTTTAACTCTGGAGaacattcttactttaattttttttggaaaaaataagaaaagaacctttaatatgaatacttgaattatttatattgatcATGGTATCCTTTTTATACCATCCCAGCCTGGGGAAACAGAGGTTTGGAGTTCATATGCCTTAACTACATTCATGTACTTGTTGGTTTTAAGTATAACTCCCTTGTTCTAACTGGGTTCTTTGTTACCTGTGGTAATTGTTTCTTGGTTGCTTTTTTCCTGATGCTTTTTATAAACCTGTGTACTGTAGAAACTGTATATGGAATAAACCTGTAGAATCA

Function

symbol description
dusp26 Acts upstream of or within axonogenesis; lens development in camera-type eye; and retina layer formation. Is expressed in brain and retina.

NR:

description
PREDICTED: dual specificity protein phosphatase 26

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020907 True 5053 mRNA 0.41 3 36187749 36194843

Neighbor

gene id symbol gene type direction distance location
AMCG00020901 bag4,LOC107702866,LOC107571962,LOC103396927 coding upstream 3731 36178925 ~ 36184018 (+)
AMCG00020902 ash2l coding upstream 73423 36101597 ~ 36114326 (+)
AMCG00020894 NA coding upstream 143771 36034871 ~ 36043978 (+)
AMCG00020896 myl7,LOC107753162,LOC107703146,LOC107657323 coding upstream 154447 36030333 ~ 36033302 (+)
AMCG00020895 gck,gk,LOC106580581,LOC106585167 coding upstream 158675 36021637 ~ 36029074 (+)
AMCG00020908 NA coding downstream 1604 36196447 ~ 36203860 (+)
AMCG00020910 rnf122 coding downstream 10487 36205330 ~ 36226349 (+)
AMCG00020909 mak16 coding downstream 40090 36234933 ~ 36241220 (+)
AMCG00020914 NA coding downstream 656652 36851495 ~ 36869578 (+)
AMCG00020919 NA coding downstream 852799 37047642 ~ 37058036 (+)
G66395 NA non-coding upstream 113328 36004619 ~ 36074421 (+)
G66342 NA non-coding upstream 330721 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 369970 35813743 ~ 35817779 (+)
G66325 NA non-coding upstream 419178 35768241 ~ 35768571 (+)
G66319 NA non-coding upstream 426717 35758108 ~ 35761032 (+)
G66524 NA non-coding downstream 530051 36724894 ~ 36725129 (+)
G66528 NA non-coding downstream 611477 36806320 ~ 36806577 (+)
G66602 NA non-coding downstream 878836 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 1093671 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 1106405 37301248 ~ 37301598 (+)
G66362 NA other upstream 279347 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 437303 35747156 ~ 35750446 (+)
G66149 NA other upstream 1022764 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 1038331 35147603 ~ 35149418 (+)
G66060 NA other upstream 1179427 34967844 ~ 35008322 (+)
G66506 NA other downstream 59856 36254699 ~ 36256511 (+)
G66551 NA other downstream 719972 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 1372193 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 1922219 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 4126270 40321113 ~ 40321821 (+)

Expression


Co-expression Network