RNA id: TU76926



Basic Information


Item Value
RNA id TU76926
length 336
lncRNA type sense_over
GC content 0.38
exon number 2
gene id G61477
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 12493801 ~ 12499426 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


NNNGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGATGCCACGGcCGAGGAGGAGGGCGAGttcgaggaggaggagggagaggaggaattGGCCTAAGctttttgtaaatttaaaaaaaaaaaaaatccaagctGTACAAACTCACTGACATTCAAAACTTATTTTCAATGTTCAGAATTTCTTTTGctgtcacttttattttttatttttttgttcggTCTGTACAGAAGACAATGTGCAaataaaactgcctttttttgGTCAAGTCTCTCTTCATTCcaaatgttttccatctttaatATTGTTGGAGACTACAAATCCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU76910 lncRNA downstream 42008 12430802 ~ 12451793 (-) True G61470
TU76846 lncRNA downstream 98773 12394285 ~ 12395028 (-) True G61424
TU76759 lncRNA downstream 491710 12001700 ~ 12002091 (-) False AMCG00020159
TU76703 lncRNA downstream 565937 11925564 ~ 11927864 (-) True G61302
TU76670 lncRNA downstream 770387 11713501 ~ 11723414 (-) True G61273
TU76944 lncRNA upstream 79245 12578671 ~ 12583748 (-) True G61488
TU77020 lncRNA upstream 219941 12719367 ~ 12743437 (-) True G61550
TU77034 lncRNA upstream 305244 12804670 ~ 12805433 (-) True G61558
TU77095 lncRNA upstream 507996 13007422 ~ 13007666 (-) True G61593
TU77227 lncRNA upstream 837590 13337016 ~ 13338101 (-) True G61696
AMCG00020175 mRNA downstream 75573 12414984 ~ 12418228 (-) True AMCG00020175
AMCG00020174 mRNA downstream 84849 12395555 ~ 12408952 (-) True AMCG00020174
AMCG00020168 mRNA downstream 112052 12376133 ~ 12381749 (-) True AMCG00020168
AMCG00020167 mRNA downstream 118653 12371831 ~ 12375148 (-) True AMCG00020167
AMCG00020164 mRNA downstream 286249 12206692 ~ 12207552 (-) True AMCG00020164
AMCG00020179 mRNA upstream 17380 12516806 ~ 12529593 (-) True AMCG00020179
AMCG00020178 mRNA upstream 51144 12550570 ~ 12562984 (-) True AMCG00020178
AMCG00020185 mRNA upstream 98233 12597659 ~ 12598234 (-) True AMCG00020185
AMCG00020184 mRNA upstream 119174 12618600 ~ 12619814 (-) True AMCG00020184
AMCG00020186 mRNA upstream 142281 12641707 ~ 12646647 (-) True AMCG00020186
TU76917 other downstream 1236 12490698 ~ 12492565 (-) False AMCG00020180
TU76919 other downstream 7467 12484369 ~ 12486334 (-) False AMCG00020180
TU76663 other downstream 792156 11695691 ~ 11701645 (-) True G61269
TU76536 other downstream 1737382 10755468 ~ 10756419 (-) True G61170
TU75987 other downstream 3653856 8839211 ~ 8839945 (-) True G60746
TU76920 other upstream 998 12500424 ~ 12509937 (-) False AMCG00020180
TU77089 other upstream 498412 12997838 ~ 12998223 (-) True G61589
TU77151 other upstream 722174 13221600 ~ 13224510 (-) True AMCG00020212
TU77373 other upstream 1096092 13595518 ~ 13596917 (-) True AMCG00020230
TU77394 other upstream 1164661 13664087 ~ 13665585 (-) False AMCG00020229

Expression Profile