RNA id: XM_043251742.1


Basic Information

Item Value
RNA id XM_043251742.1
length 2495
RNA type mRNA
GC content 0.49
exon number 16
gene id ero1b
representative True

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 11766831 ~ 11780809 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATCTCGGCCGCAGTTCGTCGCGCTCTTCTGCGccgtttttttctgttgaaattCCACTTGTTTACATTGCGCGGCTAAATATCGCATTTCCTGTCTGTTTTGTTTCCAAATATTTATCCTGCGAGCGATACCGGACAGTTAATACGTTAGAGGAATATGTATCcaaaacattcagatttttacttcgtgtatttaattacttatttgtaacactatttttatgtcatttgttttcattataggCGGTATTTGCACGTTTAAAACGATTTGACGCAATGAAGCACGTGTTACATAATTAAACCGGTTAGGCTTGCTTAATTGAAACTAATAATCAAGGAAAGAAAGTATGAAGTACGCATGGACGAAAATTTAAAATACGCAGGAAAGAACCGTCTGTTATTCAGCGTGGTGTTATCCCATTGGTCCGCTCGATGCGCTGACGTCAGCGGCATTGTGGATTTTGTAGTCTTTTATTTCTCCCTCCTCCGTTCGCTGCAGCGCTGAGCGCGCCGCGGAGGAACTACGGCGCGTCACGTGTGGGCGTGCCCGCGCGTGACGTGTTTTTGTTTGGAGGAGGAGCAACGAGGCTGAATTTCCACGCGGTGGTCGGTAAAGTTTGACAGCTCATCTCTAGCGGTTTGTGATCCCCGAGGATCTCTAACTCACCGATCCAGTCCCGAATCGGGGATGACAGCTGCTAGAAACCGCGTGAAGAAAGCGCAACACTTTAACTTAAAGAAGCTTCTGCGTTTGTAAAGGGATGTTTGGAAGCAGATGCAGTTTTTGGGAGGCGTCTCTGTTAGCTCTGGGACTTTTTGGACTTTTACATTCAAAGCAGTTAACAGGTGTCTTGGACGACTGTTTCTGTGACATCGAGAGCATTGATGTCTTCAATAACTTCAAGATTTATCCTCACATTCGCAAGCTCACAGAGAGAGACTTCTTCCGATACTACAAGGTGAACCTGAAGCGTCCGTGTCCGTTCTGGGCTGACGACGGCCATTGCTCGATCAAAGACTGTCACGTAGAGCCGTGCCCAGAGAGTAAAGTTCCTGTAGGAATTAAATCTGGCAACTATAACAAGTTCTCTCAGGCCTCCAGCAGCATCACTGATATCAGAGAGTGTGAGCAGGCACATGAACTGGGCGCTGTGAACAACACACTCAGTAATCAGAGTAAAGAGGCGTTTGCAGACTGGGCTCATCACGACGACGCTCAGGATCACTTCTGTGGTTTAGACGATGAAATGTCTCCTGATGCGGAGTACGTGGATCTGCTGCTGAACCCCGAGAGATACACCGGATATAAAGGACCCTCGGCCTGGAGAGTCTGGAACAGCATCTACGAGGAGAACTGCTTCAaGCCCAGATCAGTGTATCGTCCTCTCAATCCTCTGGCTCCCAGTCGGGgtGATGATGACGGTGAAGGATTTTACAAATGGCTGGAAGGTTTGTGTTTGGAGAAGCGTGTTTTCTATCGTCTGATCTCTGGACTCCACAGCAGCATCAACATCCACCTGTGTGCGGAGTACCTGCTGGacgAGGGCTGGGGGAAGCCGGTCTGGGGTCCTAACCTGCACGAGTTCAGGCAGCGCTTCGACCCGGCCGAGACCAAGGGCGAGGGAACGCGGCGGCTCAAGAACCTCTACTTCCTGTACCTGATCGAGCTGAGGGCGCTCTCGAAGGTGGCTCCGTACTTCGAGCGCTCCTTCATCAATCTGTACACGGGGAACTCTCAGGAGGACTCCGGCACCAAAGAGCTGCTGCTGCAGATCCTCAACGACACCAAagctTTCCCGATGCACTTTGACGAGAGCTCCATGTTTGCGGGCCATAAAATGGAGTCGAAGACACTCAAGGAGGAGTTCAGGCTTCATTTCAAGAACATCTCTCGGATCATGGACTGCGTCGGCTGCAGTAAATGTCGTCTCTGGGGCACCTTACAGACTCAGGGGCTGGGAACGGCTCTCAGGATCCTGTTCTCCGAGAAAGAGATCAAGAACCTTCCAGAAAACAGTCCGTCCAAAGGCTTCCAGCTCACGAGGCAGGAGATCGTGGCTCTGCTCAACGGATTCGCCAGACTGTCCACGAGTATCAGAGAGCTTCATAACTTCCGGTCCCTGCTGAAGGATCAGAGGTAGCTGGGGGCCGGCGGGGGGCAGCACTAGACTCAGGGACCGCAGGACCCTTCCTCTTCATCACGGCTCCGACTCGGACGGACCGCGCAGACTGCGCTTTATCACGTAGCGCTGcggttttcttcttttctttccttctcttgGGTTTGTGTGAATGTTGTGAACGCCTGTGTCTGTTCCTGCTGACGACAGTCCTCTTCGTTCTTTTAATTTGTTAGTAATCAGGTGAAGCCCATAAACGAGAACATGCCCAGGTCACATTTCACACTAAAATACAAGTAATTATACCTTTTTTCATTACTGAGAGGACTATaggctttattttctttctttatatatatatatatatatatatata

Function

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0003756 protein disulfide isomerase activity molecular_function
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor molecular_function

KEGG:

id description
K10976 ERO1LB; ERO1-like protein beta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119933 lncRNA downstream 760 11736379 ~ 11766071 (-) False G81057
TU119976 lncRNA downstream 7424 11755624 ~ 11759407 (-) True G81093
TU119977 lncRNA downstream 7424 11758737 ~ 11759407 (-) False G81093
TU119951 lncRNA downstream 81825 11680578 ~ 11685006 (-) True G81074
TU119952 lncRNA downstream 81825 11682924 ~ 11685006 (-) False G81074
TU119981 lncRNA upstream 3987 11784280 ~ 11786988 (-) True G81097
TU120064 lncRNA upstream 95195 11875488 ~ 11877649 (-) True G81158
TU120083 lncRNA upstream 118578 11898871 ~ 11955070 (-) True G81165
TU120089 lncRNA upstream 153772 11934065 ~ 11938428 (-) True G81171
TU120092 lncRNA upstream 158989 11939282 ~ 11940885 (-) True G81174
XM_043251779.1 mRNA downstream 14309 11717262 ~ 11752522 (-) True LOC122353888
XM_043252116.1 mRNA downstream 60878 11701162 ~ 11705953 (-) True rbm34
XM_043252389.1 mRNA downstream 105787 11656978 ~ 11661044 (-) True irf2bp2b
XM_043251824.1 mRNA downstream 170457 11549599 ~ 11596374 (-) True strn
XM_043252194.1 mRNA downstream 262386 11500109 ~ 11504445 (-) False cfap410
XM_043251754.1 mRNA upstream 32277 11812570 ~ 11822791 (-) True gnb4b
XM_043251762.1 mRNA upstream 76046 11856339 ~ 11859155 (-) True LOC122353870
XM_043251753.1 mRNA upstream 104265 11884558 ~ 11892192 (-) False traf3ip2b
XM_043251752.1 mRNA upstream 104265 11884558 ~ 11892190 (-) True traf3ip2b
XM_043251728.1 mRNA upstream 202143 11982436 ~ 12059316 (-) True gli2b
TU119760 other downstream 347501 11403644 ~ 11419330 (-) True G80956
TU119843 other downstream 371955 11393360 ~ 11394876 (-) False LOC122354635
TU119776 other downstream 481542 11263332 ~ 11285289 (-) True mafgb
XR_006252140.1 other downstream 505711 11251255 ~ 11261120 (-) True si:ch73-100l22.3
TU119670 other downstream 621812 11140914 ~ 11145019 (-) True srsf7b
XR_006252156.1 other upstream 120675 11900968 ~ 11901098 (-) True LOC122354705
TU120112 other upstream 293303 12073596 ~ 12074075 (-) True G81192
TU120285 other upstream 665567 12445860 ~ 12447287 (-) True G81318
TU120624 other upstream 1037829 12818122 ~ 13057881 (-) False G81512
TU120651 other upstream 1109988 12890281 ~ 12896130 (-) False G81523

Expression Profile