RNA id: TCONS_00002442



Basic Information


Item Value
RNA id TCONS_00002442
length 117
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_001486
representative True

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 46945027 ~ 46945143 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tgccacagccatatcaccctgcagcccaagaccagttacttgcgtaagctgagcagggctgagcctggccagtacataaatgggagaccacatggggaaactaggttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190709

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00002437 lncRNA downstream 111896 46826581 ~ 46833131 (-) True XLOC_001482
TCONS_00003474 lncRNA downstream 116456 46792730 ~ 46828571 (-) False XLOC_001482
TCONS_00003473 lncRNA downstream 153472 46750544 ~ 46791555 (-) True XLOC_001481
TCONS_00003472 lncRNA downstream 187484 46750544 ~ 46757543 (-) False XLOC_001481
TCONS_00002973 lncRNA downstream 206429 46725808 ~ 46738598 (-) False XLOC_001480
TCONS_00002457 lncRNA upstream 175188 47120331 ~ 47122129 (-) True XLOC_001491
TCONS_00002974 lncRNA upstream 179514 47124657 ~ 47161973 (-) False XLOC_001492
TCONS_00002458 lncRNA upstream 180467 47125610 ~ 47135341 (-) False XLOC_001492
TCONS_00002975 lncRNA upstream 180505 47125648 ~ 47135203 (-) False XLOC_001492
TCONS_00002460 lncRNA upstream 180505 47125648 ~ 47135203 (-) False XLOC_001492
TCONS_00002441 mRNA downstream 20226 46888033 ~ 46924801 (-) True XLOC_001484
TCONS_00002438 mRNA downstream 69534 46837849 ~ 46875493 (-) False XLOC_001483
TCONS_00002439 mRNA downstream 82837 46848544 ~ 46862190 (-) False XLOC_001483
TCONS_00002440 mRNA downstream 85629 46854077 ~ 46859398 (-) True XLOC_001483
TCONS_00002432 mRNA downstream 226674 46710647 ~ 46718353 (-) False XLOC_001479
TCONS_00002443 mRNA upstream 18850 46963993 ~ 46984142 (-) False XLOC_001487
TCONS_00002444 mRNA upstream 18884 46964027 ~ 46981134 (-) True XLOC_001487
TCONS_00002445 mRNA upstream 40741 46985884 ~ 46989650 (-) False XLOC_001488
TCONS_00002446 mRNA upstream 41682 46986825 ~ 46989650 (-) True XLOC_001488
TCONS_00002447 mRNA upstream 54298 46999441 ~ 47089818 (-) False XLOC_001489
TCONS_00002436 other downstream 201475 46725808 ~ 46743552 (-) True XLOC_001480
TCONS_00002435 other downstream 222322 46722622 ~ 46722705 (-) False XLOC_001480
TCONS_00002434 other downstream 222509 46722379 ~ 46722518 (-) False XLOC_001480
TCONS_00002426 other downstream 314323 46627489 ~ 46630704 (-) True XLOC_001475
TCONS_00002410 other downstream 1282276 45655075 ~ 45662751 (-) True XLOC_001465
TCONS_00002449 other upstream 73868 47019011 ~ 47071948 (-) False XLOC_001489
TCONS_00002450 other upstream 121350 47066493 ~ 47089818 (-) True XLOC_001489
TCONS_00002452 other upstream 163969 47109112 ~ 47111776 (-) False XLOC_001490
TCONS_00002466 other upstream 760984 47706127 ~ 47706244 (-) True XLOC_001497
TCONS_00002475 other upstream 2430832 49375975 ~ 49379354 (-) True XLOC_001507