Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU155897 |
| length | 221 |
| lncRNA type | intronic |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G131954 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13315443 ~ 13315663 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU155870 | lncRNA | upstream | 40348 | 13274135 ~ 13275095 (+) | True | G131930 |
| TU155597 | lncRNA | upstream | 291597 | 13022216 ~ 13023846 (+) | True | G131715 |
| TU155603 | lncRNA | upstream | 309353 | 13003395 ~ 13006090 (+) | False | G131721 |
| TU155604 | lncRNA | upstream | 309353 | 13003395 ~ 13006090 (+) | True | G131721 |
| TU155606 | lncRNA | upstream | 309353 | 13003395 ~ 13006090 (+) | False | G131721 |
| TU155899 | lncRNA | downstream | 1635 | 13317298 ~ 13317506 (+) | True | G131956 |
| TU155905 | lncRNA | downstream | 9841 | 13325504 ~ 13325713 (+) | True | G131962 |
| TU155912 | lncRNA | downstream | 50217 | 13365880 ~ 13368176 (+) | True | G131968 |
| TU155919 | lncRNA | downstream | 76862 | 13392525 ~ 13400280 (+) | True | G131972 |
| TU155931 | lncRNA | downstream | 105042 | 13420705 ~ 13422214 (+) | True | G131980 |
| XM_026929521.2 | mRNA | upstream | 90124 | 13214466 ~ 13225319 (+) | True | gpr173 |
| XM_026930223.2 | mRNA | upstream | 170236 | 13136689 ~ 13145207 (+) | True | wasb |
| XM_034306692.1 | mRNA | upstream | 180814 | 13113706 ~ 13134629 (+) | True | slc38a5b |
| XM_026917085.2 | mRNA | upstream | 180814 | 13113706 ~ 13134629 (+) | False | slc38a5b |
| XM_026926775.2 | mRNA | upstream | 254005 | 13055488 ~ 13061438 (+) | True | LOC113534124 |
| XM_034306953.1 | mRNA | downstream | 56829 | 13372492 ~ 13386385 (+) | True | tpd52l2a |
| XM_026926458.2 | mRNA | downstream | 56829 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_034306954.1 | mRNA | downstream | 56829 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_026926468.2 | mRNA | downstream | 56829 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_034306955.1 | mRNA | downstream | 56829 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| trnaf-gaa_25 | other | upstream | 251321 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnav-cac_9 | other | upstream | 253435 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnad-guc_1 | other | upstream | 933373 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1604898 | 11709454 ~ 11710545 (+) | False | porcn |
| TU154760 | other | upstream | 1607482 | 11705655 ~ 11707961 (+) | False | porcn |
| trnae-cuc_18 | other | downstream | 53885 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| TU156117 | other | downstream | 389593 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| TU156645 | other | downstream | 1006509 | 14322172 ~ 14323450 (+) | True | G132595 |
| trnae-cuc_19 | other | downstream | 1664170 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU157849 | other | downstream | 2686398 | 16002061 ~ 16011604 (+) | False | G133631 |
