Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU155606 |
| length | 817 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 5 |
| gene id | G131721 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13003395 ~ 13006090 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578521.1 | lncRNA | upstream | 61939 | 12938663 ~ 12941456 (+) | False | LOC117597771 |
| TU155563 | lncRNA | upstream | 62764 | 12937304 ~ 12940631 (+) | True | LOC117597771 |
| XR_004578530.1 | lncRNA | upstream | 193657 | 12809123 ~ 12809738 (+) | True | LOC117597782 |
| TU155457 | lncRNA | upstream | 273873 | 12712625 ~ 12729522 (+) | True | G131605 |
| XR_004578634.1 | lncRNA | upstream | 301894 | 12700712 ~ 12701501 (+) | True | LOC117597872 |
| TU155597 | lncRNA | downstream | 16126 | 13022216 ~ 13023846 (+) | True | G131715 |
| TU155870 | lncRNA | downstream | 268045 | 13274135 ~ 13275095 (+) | True | G131930 |
| TU155897 | lncRNA | downstream | 309353 | 13315443 ~ 13315663 (+) | True | G131954 |
| TU155899 | lncRNA | downstream | 311208 | 13317298 ~ 13317506 (+) | True | G131956 |
| TU155905 | lncRNA | downstream | 319414 | 13325504 ~ 13325713 (+) | True | G131962 |
| XM_026939856.2 | mRNA | upstream | 8616 | 12985427 ~ 12994779 (+) | True | inavaa |
| XM_026947120.2 | mRNA | upstream | 24029 | 12978027 ~ 12979366 (+) | True | c8h1orf194 |
| XM_026947202.2 | mRNA | upstream | 24029 | 12978031 ~ 12979366 (+) | False | c8h1orf194 |
| XM_026928189.2 | mRNA | upstream | 82209 | 12916438 ~ 12921186 (+) | True | lhfpl5b |
| XM_034307047.1 | mRNA | upstream | 205028 | 12792450 ~ 12798367 (+) | False | dclre1b |
| XM_026926859.2 | mRNA | downstream | 49360 | 13055450 ~ 13061438 (+) | False | LOC113534124 |
| XM_026926775.2 | mRNA | downstream | 49398 | 13055488 ~ 13061438 (+) | True | LOC113534124 |
| XM_034306692.1 | mRNA | downstream | 107616 | 13113706 ~ 13134629 (+) | True | slc38a5b |
| XM_026917085.2 | mRNA | downstream | 107616 | 13113706 ~ 13134629 (+) | False | slc38a5b |
| XM_026930223.2 | mRNA | downstream | 130599 | 13136689 ~ 13145207 (+) | True | wasb |
| trnad-guc_1 | other | upstream | 621325 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1292850 | 11709454 ~ 11710545 (+) | False | porcn |
| TU154756 | other | upstream | 1293963 | 11705655 ~ 11709432 (+) | False | porcn |
| trnav-cac_9 | other | downstream | 55846 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnaf-gaa_25 | other | downstream | 57960 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnae-cuc_18 | other | downstream | 363458 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| TU156117 | other | downstream | 699166 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| TU156645 | other | downstream | 1316082 | 14322172 ~ 14323450 (+) | True | G132595 |
