RNA id: AMCG00014384


Basic Information

Item Value
RNA id AMCG00014384
length 777
RNA type mRNA
GC content 0.46
exon number 3
gene id AMCG00014384
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11893760 ~ 11895883 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTTAAGAAAATCAATGCCGTTTTCCGGCCCAACCAAGGACAGAAAAGTGGGGATGGCTACAAAACTAACGGCCATCAGAAAGCATGTGCAGTGAAGCTGGTGAGGAGCACCTCGATGCTCATCGTAGGGGAGAGTCGTCAAAAGACCAGTGAAGCTTCCTTAAAGAGGAGCAAAAGCTCCATAAGTATCGAGTCGACGTCATTTTACTACTACAGACAAGAGGACCGGATCTGGTTGTATTCCAGGACTCAGGACTGCCTTCAGTATCTGGAGGATTTGATGGCTTTGAGAAAGCAATATATCAACAGTGTCAACAACCTGAAAAACAACGGGAGAAAAAACAACCCTTCTTCCCAGGCCAGGCCGGTTCCCCCTGCACCCCCCACCAAAGACACCAAGATAAAACCAAAAGCCCAGGCTCCTGCCATTCCCGATGAAGTCAACACTCTGGAGTACTTTGATGCCATCATCGCTAGTTGTGACTCAGAGAAGGAAAGCAAGCCTCACGTGGACAATGGACATGCAGATGTTGATTTCATTGttGCCACCAGCACCAGTGAACATGACTTGCATTCAAACTGGGTGCTTCGAGATCCAAGGAGATTCTCAATGGATGAGTCAAAGCTAAAAAAGTCTGACAGCAAATTGCAGAGGAAGAGTGAGAGTGGAACAGTCAGCAGCAAAAAAAGACTGCAAAGAAATCCCATACATCTACCCAAAGTGGTGGAAAGTGCCTTTCAAACACTTAGATTTAAACCAAAAGAGAAGAAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87141 lncRNA downstream 13304 11879097 ~ 11880456 (-) True G69759
TU87123 lncRNA downstream 122367 11769690 ~ 11771393 (-) True G69743
TU86933 lncRNA downstream 756674 11132788 ~ 11137086 (-) False AMCG00014365
TU86856 lncRNA downstream 1072688 10815771 ~ 10821072 (-) True G69539
TU86853 lncRNA downstream 1097571 10795883 ~ 10796189 (-) True G69536
TU87239 lncRNA upstream 1074370 12970253 ~ 12970555 (-) True G69849
TU87308 lncRNA upstream 1189480 13085363 ~ 13086345 (-) True G69896
TU87309 lncRNA upstream 1189480 13085363 ~ 13086345 (-) False G69896
TU87311 lncRNA upstream 1189480 13085363 ~ 13086345 (-) False G69896
TU87328 lncRNA upstream 1191725 13087608 ~ 13096336 (-) False AMCG00014412
AMCG00014386 mRNA downstream 2287 11882495 ~ 11891473 (-) True AMCG00014386
AMCG00014385 mRNA downstream 26231 11866611 ~ 11867529 (-) True AMCG00014385
AMCG00014379 mRNA downstream 138299 11750191 ~ 11755461 (-) True AMCG00014379
AMCG00014380 mRNA downstream 171307 11697189 ~ 11722453 (-) True AMCG00014380
AMCG00014374 mRNA downstream 226223 11660011 ~ 11667537 (-) True AMCG00014374
AMCG00014390 mRNA upstream 88190 11984073 ~ 12003809 (-) True AMCG00014390
AMCG00014391 mRNA upstream 301156 12197039 ~ 12199190 (-) True AMCG00014391
AMCG00014389 mRNA upstream 825859 12721742 ~ 12726644 (-) True AMCG00014389
AMCG00014395 mRNA upstream 833844 12729727 ~ 12739665 (-) True AMCG00014395
AMCG00014396 mRNA upstream 882600 12778483 ~ 12780838 (-) True AMCG00014396
TU87063 other downstream 231267 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 1095613 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 2576593 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 3509536 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 3735170 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 16433856 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 17493407 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 20367284 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 20701579 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 20701579 32597462 ~ 32619149 (-) False G73127

Expression Profile