RNA id: TU86845


Basic Information

Item Value
RNA id TU86845
length 316
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G69528
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10739416 ~ 10739930 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTCAAGTTTGCTAGAGCCACTAATGAAATTGCTGTCACGCCCATTGTCTTGAGACGGCTGGCATGACGGGGCACCAGTTGTGTCTCTGAACATGGCATTTTTTTCAAGAAGGCTGTCCTGCTTGGAGATGGAGAGGGTAAGAGGATTCCTGCAGGATAAAagcAGTTTCTTCACTTGCATGGACACATCATGGCTGTTTTCTTCACACGCTTCCTCTGCTGGTAATGAGAGAGAGGATGGGTCCCTCAGCCTTTCCTCCCAGGTAGCCTCTGCCTTCAGAAGTATTTCTGCTATAAATTCAGAGGCTGCCATGTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86840 lncRNA downstream 58124 10681070 ~ 10681292 (-) True G69523
TU86807 lncRNA downstream 260407 10420180 ~ 10479009 (-) True G69495
TU86793 lncRNA downstream 398470 10337887 ~ 10340946 (-) True G69483
TU86735 lncRNA downstream 678324 10058097 ~ 10061092 (-) False AMCG00014339
TU86736 lncRNA downstream 678324 10058097 ~ 10061092 (-) True AMCG00014339
TU86847 lncRNA upstream 26670 10766600 ~ 10768258 (-) True G69530
TU86848 lncRNA upstream 33253 10773183 ~ 10773422 (-) True G69531
TU86849 lncRNA upstream 37121 10777051 ~ 10777441 (-) True G69532
TU86852 lncRNA upstream 52989 10792919 ~ 10793146 (-) True G69535
TU86853 lncRNA upstream 55953 10795883 ~ 10796189 (-) True G69536
AMCG00014353 mRNA downstream 31398 10652279 ~ 10708018 (-) True AMCG00014353
AMCG00014354 mRNA downstream 212447 10525613 ~ 10526969 (-) True AMCG00014354
AMCG00014347 mRNA downstream 411185 10318244 ~ 10328231 (-) True AMCG00014347
AMCG00014349 mRNA downstream 438055 10300003 ~ 10301361 (-) True AMCG00014349
AMCG00014348 mRNA downstream 483041 10241006 ~ 10256375 (-) True AMCG00014348
AMCG00014358 mRNA upstream 160078 10900008 ~ 10903196 (-) True AMCG00014358
AMCG00014359 mRNA upstream 221319 10961249 ~ 10974117 (-) True AMCG00014359
AMCG00014360 mRNA upstream 234535 10974465 ~ 10991144 (-) True AMCG00014360
AMCG00014364 mRNA upstream 348817 11088747 ~ 11096433 (-) True AMCG00014364
AMCG00014368 mRNA upstream 365048 11104978 ~ 11121831 (-) True AMCG00014368
TU86630 other downstream 1422249 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 2355192 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 2580826 8156229 ~ 8158590 (-) True AMCG00014298
TU86293 other downstream 2600290 8137331 ~ 8139126 (-) False AMCG00014297
TU86071 other downstream 3316125 7417598 ~ 7423291 (-) False AMCG00014278
TU86854 other upstream 56786 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 920091 11660021 ~ 11662493 (-) False AMCG00014374
TU90285 other upstream 17589809 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 18649360 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 21523237 32263167 ~ 32263427 (-) True G73047

Expression Profile