Fish Single-cell RNA Database

CELL TYPE: Isl1+ group

Distribution of Isl1+ group in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000008867	rap1b	4: 18852821 ~ 18939338 (-)
ENSDARG00000053625	anxa2b	7: 29518396 ~ 29534001 (-)
ENSDARG00000075800	calml4a	7: 34492744 ~ 34496196 (+)
ENSDARG00000035732	arntl1b	7: 66048102 ~ 66105828 (+)
ENSDARG00000061850	si:dkey-19b23.13	7: 20471315 ~ 20502769 (+)
ENSDARG00000098435	BX005003.1	7: 43131218 ~ 43423919 (-)
ENSDARG00000073957	tox3	7: 36898622 ~ 36969256 (+)
ENSDARG00000025797	abhd2a	7: 13824150 ~ 13858955 (+)
ENSDARG00000029063	clpxa	7: 13639473 ~ 13679937 (+)
ENSDARG00000004023	isl1	5: 40728613 ~ 40734045 (-)
ENSDARG00000013434	hira	5: 18047111 ~ 18072844 (+)
ENSDARG00000098646	mthfd2	5: 69716458 ~ 69732754 (+)
ENSDARG00000002405	si:ch211-225b11.1	5: 20786772 ~ 20814588 (-)
ENSDARG00000035610	zgc:113208	5: 22605530 ~ 22621417 (-)
ENSDARG00000093569	bckdhbl	3: 16240984 ~ 16289826 (-)
ENSDARG00000070061	gfer	3: 40162399 ~ 40168482 (+)
ENSDARG00000014871	syngr3a	3: 40170216 ~ 40180201 (+)
ENSDARG00000075015	soul5	3: 53476155 ~ 53486169 (-)
ENSDARG00000074671	nptx1l	3: 59453467 ~ 59472422 (-)
ENSDARG00000074301	cth	6: 37409558 ~ 37422841 (-)
ENSDARG00000077047	ptprnb	6: 13920479 ~ 13987739 (+)
ENSDARG00000092660	cyp27c1	6: 9568149 ~ 9581949 (-)
ENSDARG00000044562	cycsb	6: 10910589 ~ 10912424 (-)
ENSDARG00000037057	gcdha	6: 8314451 ~ 8330577 (+)
ENSDARG00000013144	atp1b1a	6: 29217392 ~ 29227487 (+)
ENSDARG00000074248	tmem237b	6: 9898683 ~ 9916534 (+)
ENSDARG00000057497	stk35l	6: 38845676 ~ 38861349 (+)
ENSDARG00000100374	txnrd3	6: 1161224 ~ 1187749 (-)
ENSDARG00000069423	tmie	2: 2223837 ~ 2279311 (+)
ENSDARG00000058734	prdx1	2: 6104378 ~ 6115688 (-)
ENSDARG00000013576	gadd45bb	2: 36939749 ~ 36941988 (+)
ENSDARG00000102887	abhd4	2: 51645164 ~ 51657107 (+)
ENSDARG00000034503	per2	2: 48309600 ~ 48375342 (-)
ENSDARG00000022303	higd1a	2: 2168547 ~ 2175629 (+)
ENSDARG00000089138	si:ch1073-440b2.1	1: 28391631 ~ 28473487 (-)
ENSDARG00000070266	spock3	1: 20635190 ~ 20706296 (+)
ENSDARG00000013881	pi4k2b	1: 15258641 ~ 15285455 (+)
ENSDARG00000092870	BX936337.1	9: 30245637 ~ 30248034 (-)
ENSDARG00000062148	si:dkey-100n23.3	9: 30217828 ~ 30247961 (-)
ENSDARG00000055543	appb	9: 35026415 ~ 35155089 (-)
ENSDARG00000011770	dhrs12	9: 23808546 ~ 23812636 (+)
ENSDARG00000056167	hspe1	9: 32301017 ~ 32305007 (+)
ENSDARG00000056160	hspd1	9: 32286605 ~ 32300783 (-)
ENSDARG00000109373	tmbim1b	9: 10758339 ~ 10769097 (-)
ENSDARG00000056642	hdac9b	16: 19840146 ~ 20006270 (-)
ENSDARG00000060112	sybu	16: 39146696 ~ 39168840 (+)
ENSDARG00000006598	sgk2b	16: 26530426 ~ 26537114 (-)
ENSDARG00000058732	scgn	16: 6356460 ~ 6377672 (-)
ENSDARG00000042630	hebp2	20: 30894093 ~ 30901034 (-)
ENSDARG00000043531	jun	20: 15552657 ~ 15554606 (+)
ENSDARG00000029036	rab32a	20: 32009271 ~ 32045182 (-)
ENSDARG00000013628	cd164	20: 32118559 ~ 32139062 (+)
ENSDARG00000034056	csnk1g2b	8: 20495889 ~ 20559955 (+)
ENSDARG00000058454	dynll1	8: 2487250 ~ 2491471 (+)
ENSDARG00000039754	xpc	8: 26007308 ~ 26032245 (+)
ENSDARG00000013063	oxct1a	8: 31716872 ~ 31818916 (+)
ENSDARG00000093042	si:dkey-104n9.1	8: 12843300 ~ 12847483 (-)
ENSDARG00000071203	sptssa	17: 9944495 ~ 9950911 (-)
ENSDARG00000044092	atp5if1b	17: 24613255 ~ 24614724 (+)
ENSDARG00000001463	tdh2	17: 25414033 ~ 25425321 (+)
ENSDARG00000032623	rcan3	17: 26879725 ~ 26926577 (-)
ENSDARG00000102257	soul3	17: 660126 ~ 681142 (-)
ENSDARG00000026406	anxa5a	14: 46410766 ~ 46434196 (+)
ENSDARG00000071586	tgfbi	14: 26511041 ~ 26536504 (-)
ENSDARG00000078106	ocrl	14: 33825482 ~ 33859149 (-)
ENSDARG00000075048	lonrf1	14: 34068075 ~ 34092744 (+)
ENSDARG00000093448	mpc1	13: 281214 ~ 285151 (+)
ENSDARG00000079516	cisd1	13: 41910342 ~ 41917050 (-)
ENSDARG00000033285	gsto2	13: 25396896 ~ 25402772 (+)
ENSDARG00000024278	adh8b	13: 12633223 ~ 12646752 (-)
ENSDARG00000041691	bhlhe41	18: 16125852 ~ 16130165 (+)
ENSDARG00000057698	ctsd	18: 16133595 ~ 16146081 (+)
ENSDARG00000068374	si:ch211-132b12.7	18: 40668615 ~ 40684792 (-)
ENSDARG00000096721	si:rp71-1c10.11	12: 28964034 ~ 28971002 (-)
ENSDARG00000062672	kcnj19b	12: 16062560 ~ 16084835 (-)
ENSDARG00000100585	coa3a	12: 3571770 ~ 3574657 (+)
ENSDARG00000105592	CR936442.1	19: 7966116 ~ 7968667 (+)
ENSDARG00000018259	atp1a3a	19: 6328234 ~ 6385594 (-)
ENSDARG00000016721	sdha	19: 7276060 ~ 7291733 (-)
ENSDARG00000057913	syt11a	19: 23982466 ~ 24034710 (+)
ENSDARG00000035990	cited4a	19: 15851226 ~ 15855427 (-)
ENSDARG00000036924	tatdn1	19: 167612 ~ 169846 (+)
ENSDARG00000040815	tsku	15: 29343280 ~ 29354020 (-)
ENSDARG00000035175	schip1	15: 1372343 ~ 1436707 (+)
ENSDARG00000104664	dclk1b	15: 32821392 ~ 32891268 (+)
ENSDARG00000015134	camkk1b	15: 15314189 ~ 15331501 (+)
ENSDARG00000077396	tlcd2	15: 25398127 ~ 25435085 (-)
ENSDARG00000059035	porb	15: 1847135 ~ 1885247 (-)
ENSDARG00000042180	foxl2a	15: 7054754 ~ 7058214 (+)
ENSDARG00000099203	atp1b2a	23: 44732863 ~ 44763861 (+)
ENSDARG00000104782	oaz1b	21: 723998 ~ 735587 (+)
ENSDARG00000104326	si:dkey-183i3.9	21: 25181003 ~ 25183430 (+)
ENSDARG00000004754	hspa4a	21: 43137500 ~ 43171249 (-)
ENSDARG00000100499	cpeb4b	21: 41310551 ~ 41369539 (-)
ENSDARG00000115557	cox7b	21: 37442458 ~ 37445458 (+)
ENSDARG00000070083	atp5f1b	11: 13207898 ~ 13213059 (+)
ENSDARG00000004060	bhlhe40	11: 35759652 ~ 35763323 (-)
ENSDARG00000033609	map1lc3a	11: 26609110 ~ 26615608 (+)
ENSDARG00000010519	per3	11: 39959039 ~ 40021080 (+)
ENSDARG00000061099	nfasca	11: 23704410 ~ 23884805 (+)
ENSDARG00000078647	samsn1b	10: 38417512 ~ 38428094 (+)
ENSDARG00000019498	cry5	10: 39264802 ~ 39283883 (-)
ENSDARG00000068992	hspa8	10: 29849497 ~ 29858018 (+)
ENSDARG00000104458	rnasekb	10: 22916113 ~ 22918214 (-)
ENSDARG00000074328	apba1b	10: 15777064 ~ 15813279 (+)
ENSDARG00000026322	dhrs13a.1	10: 36795861 ~ 36808348 (-)
ENSDARG00000054036	rnf34b	10: 41765616 ~ 41817109 (+)
ENSDARG00000099358	hccsb	24: 31081504 ~ 31092711 (-)
ENSDARG00000036577	atp6v0cb	24: 39158283 ~ 39175750 (+)
ENSDARG00000093044	si:ch211-161h7.5	24: 20909922 ~ 20915050 (-)
ENSDARG00000058730	rdh10a	24: 13251480 ~ 13272843 (-)
ENSDARG00000079762	si:dkey-253d23.4	22: 9871238 ~ 9880408 (+)
ENSDARG00000071403	oaz1a	22: 20714624 ~ 20720427 (-)
ENSDARG00000038288	cd151	25: 3809733 ~ 3830272 (-)
ENSDARG00000055129	pim3	25: 29662411 ~ 29666902 (+)
ENSDARG00000092825	si:dkey-42p14.3	25: 26895394 ~ 26899520 (+)
ENSDARG00000045926	crabp1a	25: 6306885 ~ 6337380 (+)
ENSDARG00000098247	det1	25: 12399046 ~ 12412704 (-)
ENSDARG00000045804	abhd2b	25: 19120529 ~ 19139259 (-)
ENSDARG00000063911	mt-atp6	MT: 9052 ~ 9735 (+)
--	dnaja4	--
--	fam213b	--
--	ptp4a3	--
--	si:dkeyp-94b4.1	--
--	sox4a.1	--
--	zgc:100906	--
--	zgc:112255	--
--	zgc:56493	--
--	zgc:66475	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Isl1+ group.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE148591 (6mpf)	Danio rerio	pituitary	11	Isl1+ group	baseline	6mpf, male, Sox17:CreERT2	ENSDARG00000004023 (isl1)	marker	DOI:10.1126/science.aba4767
	GSE148591 (3mpf)	Danio rerio	pituitary	12	Isl1+ group	transplant	3mpf, graft transplantation during early embryogenesis	ENSDARG00000004023 (isl1)	marker	DOI:10.1126/science.aba4767

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Isl1+ group

Distribution of Isl1+ group in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences