Fish Single-cell RNA Database

CELL TYPE: Prechordal plate,polster

Distribution of Prechordal plate,polster in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000057983	svopl	4: 9769050 ~ 9781132 (-)
ENSDARG00000059043	ntf3	4: 4397503 ~ 4431975 (-)
ENSDARG00000097583	arfgap3	4: 77957611 ~ 77965510 (+)
ENSDARG00000025859	lmf2b	4: 9478500 ~ 9502846 (+)
ENSDARG00000073970	mctp2b	7: 15736230 ~ 15788356 (+)
ENSDARG00000078829	ccdc149a	7: 71350469 ~ 71384391 (-)
ENSDARG00000093687	si:dkey-193c22.1	5: 40200818 ~ 40210447 (-)
ENSDARG00000035131	surf4l	5: 63629000 ~ 63644938 (-)
ENSDARG00000060978	atp2a3	5: 31168096 ~ 31269354 (+)
ENSDARG00000004023	isl1	5: 40728613 ~ 40734045 (-)
ENSDARG00000035329	capns1a	5: 36654817 ~ 36665694 (+)
ENSDARG00000068503	gbgt1l4	5: 23788592 ~ 23805387 (-)
ENSDARG00000101063	CABZ01058650.1	5: 4533244 ~ 4547917 (+)
ENSDARG00000036994	tbc1d16	3: 18437397 ~ 18502030 (+)
ENSDARG00000038213	slc35b1	3: 20963162 ~ 20982706 (-)
ENSDARG00000062757	zgc:158403	3: 14641962 ~ 14688110 (+)
ENSDARG00000025338	hagh	3: 18774511 ~ 18792534 (-)
ENSDARG00000086189	mgp	3: 1414870 ~ 1434135 (-)
ENSDARG00000006786	copz2	3: 24094581 ~ 24111412 (+)
ENSDARG00000094695	si:dkey-204f11.64	3: 34140507 ~ 34147100 (+)
ENSDARG00000001804	zgc:112148	3: 56861059 ~ 56871984 (-)
ENSDARG00000052429	syngr2a	3: 57766627 ~ 57779801 (-)
ENSDARG00000026655	tspo	6: 40578219 ~ 40583253 (-)
ENSDARG00000073684	quo	6: 2030703 ~ 2092659 (+)
ENSDARG00000057688	ical1	6: 12870744 ~ 12912606 (-)
ENSDARG00000037000	fkbp11	6: 7428613 ~ 7439490 (-)
ENSDARG00000038792	klf17	2: 33326522 ~ 33328688 (+)
ENSDARG00000056347	rab3aa	2: 24867534 ~ 24878813 (+)
ENSDARG00000003757	cnpy1	2: 29985664 ~ 29996036 (-)
ENSDARG00000004396	b3gnt5b	2: 7749394 ~ 7757273 (-)
ENSDARG00000030108	sec22ba	2: 9970942 ~ 9983661 (+)
ENSDARG00000039098	ca8	2: 21855036 ~ 21878527 (+)
ENSDARG00000056369	ufsp2	1: 17699471 ~ 17711676 (-)
ENSDARG00000015495	klf3	1: 18594146 ~ 18615063 (-)
ENSDARG00000031164	tuba8l2	1: 5402476 ~ 5419116 (+)
ENSDARG00000005823	slc39a10	9: 24920677 ~ 24951662 (+)
ENSDARG00000039335	st6gal2a	9: 6009077 ~ 6127872 (+)
ENSDARG00000041110	dnajc3a	9: 29484043 ~ 29497916 (-)
ENSDARG00000041339	zgc:92380	9: 48007081 ~ 48039964 (+)
ENSDARG00000099014	fxyd1	16: 45202602 ~ 45225520 (-)
ENSDARG00000002445	prdm1a	16: 7430998 ~ 7443388 (-)
ENSDARG00000011824	pbxip1b	16: 22750174 ~ 22775528 (-)
ENSDARG00000019902	rcvrn2	16: 13911692 ~ 13921589 (-)
ENSDARG00000027046	scyl3	20: 34012571 ~ 34028969 (-)
ENSDARG00000033871	derl3	8: 30921403 ~ 30929638 (+)
ENSDARG00000056331	ahcyl1	8: 24971890 ~ 25011157 (-)
ENSDARG00000062892	foxe3	8: 19668654 ~ 19670305 (+)
ENSDARG00000097959	si:dkey-248g15.3	17: 2549503 ~ 2555215 (+)
ENSDARG00000103849	mdh1ab	17: 24439532 ~ 24444402 (+)
ENSDARG00000100564	sil1	14: 38795518 ~ 38809561 (-)
ENSDARG00000016085	mbnl3	14: 30986754 ~ 31080183 (-)
ENSDARG00000102433	sytl4	14: 35424539 ~ 35441425 (+)
ENSDARG00000036194	pitx2	14: 36218072 ~ 36231211 (+)
ENSDARG00000001880	stx3a	14: 21699129 ~ 21751346 (+)
ENSDARG00000077481	si:dkey-76k16.6	13: 33658871 ~ 33662523 (-)
ENSDARG00000039757	mcfd2	13: 8682176 ~ 8692860 (-)
ENSDARG00000079840	kcnma1a	13: 16521898 ~ 16886118 (+)
ENSDARG00000012788	foxa3	18: 46350574 ~ 46354269 (-)
ENSDARG00000078458	ppp1r37	18: 48864367 ~ 48936001 (+)
ENSDARG00000036291	nucb2b	18: 38191346 ~ 38210092 (+)
ENSDARG00000095254	si:dkey-239j18.2	12: 16592408 ~ 16595406 (-)
ENSDARG00000089806	si:dkey-239j18.3	12: 16634442 ~ 16636627 (-)
ENSDARG00000075527	zgc:174154	12: 16758972 ~ 16764751 (-)
ENSDARG00000089750	si:dkey-26g8.5	12: 16919411 ~ 16923162 (-)
ENSDARG00000045092	cdk5rap3	12: 28825735 ~ 28837752 (+)
ENSDARG00000045172	minpp1b	12: 17482607 ~ 17492885 (-)
ENSDARG00000045166	bhlha15	12: 17754859 ~ 17756905 (+)
ENSDARG00000057206	nmt1b	12: 15666949 ~ 15676285 (+)
ENSDARG00000100833	si:dkey-269i1.4	12: 16555603 ~ 16558106 (-)
ENSDARG00000061713	tpd52	19: 31904836 ~ 31939039 (+)
ENSDARG00000070479	tspan13b	19: 30387999 ~ 30399876 (+)
ENSDARG00000070702	s100v2	19: 24262263 ~ 24267823 (-)
ENSDARG00000070094	sytl1	19: 42573724 ~ 42588510 (-)
ENSDARG00000018397	hpca	19: 32622177 ~ 32710922 (-)
ENSDARG00000071014	s100u	19: 7575141 ~ 7591062 (+)
ENSDARG00000100917	slc30a8	19: 46343385 ~ 46362232 (+)
ENSDARG00000101115	med30	19: 46372115 ~ 46411358 (+)
ENSDARG00000036764	hax1	19: 7799036 ~ 7805132 (+)
ENSDARG00000099555	foxo1a	15: 3284416 ~ 3379041 (+)
ENSDARG00000098368	aplp1	15: 37105986 ~ 37231035 (+)
ENSDARG00000006603	csrp1a	23: 5765514 ~ 5818992 (-)
ENSDARG00000030547	rnd1a	23: 17800717 ~ 17815253 (+)
ENSDARG00000036785	si:ch211-226m16.2	23: 33337734 ~ 33350990 (-)
ENSDARG00000078191	zbtb46	23: 13721826 ~ 13806495 (+)
ENSDARG00000069980	lman1	21: 10701834 ~ 10732281 (+)
ENSDARG00000069503	cldnh	21: 25739295 ~ 25741411 (-)
ENSDARG00000076092	slc31a2	21: 13785969 ~ 13796940 (+)
ENSDARG00000006251	ell2	21: 11749097 ~ 11774964 (+)
ENSDARG00000103915	ero1b	11: 44502410 ~ 44524932 (+)
ENSDARG00000029474	camk1b	11: 4026229 ~ 4132662 (+)
ENSDARG00000106471	FQ311892.1	11: 730807 ~ 730923 (+)
ENSDARG00000053381	plpp1a	10: 8265972 ~ 8295342 (-)
ENSDARG00000013670	hyou1	10: 29770120 ~ 29791466 (+)
ENSDARG00000057672	plpp5	10: 20527427 ~ 20537062 (-)
ENSDARG00000044261	si:ch211-243g18.2	10: 9550419 ~ 9571012 (+)
ENSDARG00000026500	xkr9	24: 14202327 ~ 14212521 (-)
ENSDARG00000012671	inhbaa	24: 3050020 ~ 3062610 (+)
ENSDARG00000057125	pld1b	24: 26659010 ~ 26715174 (-)
ENSDARG00000041703	rrbp1b	22: 25086567 ~ 25137256 (+)
ENSDARG00000029841	tmprss9	22: 10757848 ~ 10770418 (+)
ENSDARG00000055592	capn2b	22: 26328063 ~ 26353916 (-)
--	mal	--
--	atpif1b	--
--	dnase1l3	--
--	he1a	--
--	hrsp12	--
--	si:ch211-163l21.8	--
--	zgc:162964	--
--	ctslb.1	--
--	he1b	--
--	si:dkey-269i1.2	--
--	si:dkey-269i1.4.1	--
--	si:dkey-26g8.4	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Prechordal plate,polster.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE158142 (16hpf)	Danio rerio	head	15	Prechordal plate,polster	baseline	16hpf, 14 somites, untreatment	ENSDARG00000086189 (mgp)	marker	DOI:10.1016/j.neuron.2020.09.023
	GSE158142 (16hpf)	Danio rerio	head	15	Prechordal plate,polster	baseline	16hpf, 14 somites, untreatment	ENSDARG00000038792 (klf17)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Prechordal plate,polster

Distribution of Prechordal plate,polster in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences