DATASET ID: PRJNA551501 (2mpf)

Basic information

Tissue / Organ thyroid gland
Experiment type baseline
Sample 2mpf, Tg(tg:mVenus-T2A-NTR)
Source dataset ID SRR9609653
Project ID PRJNA551501
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Stromal ENSDARG00000020007 (col1a2) protein_coding marker DOI:10.15252/embr.202050612
    2 Stromal ENSDARG00000020007 (col1a2) protein_coding marker DOI:10.15252/embr.202050612
    4 Stromal ENSDARG00000091211 (adh8a) protein_coding marker DOI:10.15252/embr.202050612
    5 Non-follicular epithelium ENSDARG00000044356 (tp63) protein_coding marker DOI:10.15252/embr.202050612
    6 Muscle cells ENSDARG00000045180 (acta2) protein_coding marker DOI:10.15252/embr.202050612
    7 Thyrocytes ENSDARG00000005392 (slc5a5) protein_coding marker DOI:10.15252/embr.202050612
    7 Thyrocytes ENSDARG00000042707 (cx30.3) protein_coding marker DOI:10.15252/embr.202050612
    7 Thyrocytes ENSDARG00000058734 (prdx1) protein_coding marker DOI:10.15252/embr.202050612
    8 Endothelium ENSDARG00000036616 (gpr182) protein_coding marker DOI:10.15252/embr.202050612
    9 Immune cells ENSDARG00000104077 (fcer1gl) protein_coding marker DOI:10.15252/embr.202050612
    12 Endothelium ENSDARG00000036616 (gpr182) protein_coding marker DOI:10.15252/embr.202050612
    13 Gills ENSDARG00000088589 (ponzr3) protein_coding marker DOI:10.15252/embr.202050612

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)