DATASET ID: PRJNA415636 (pancreas, liver)

Basic information

Tissue / Organ hepatopancreas
Experiment type baseline
Sample adult, Zebrabow M, pancreas and liver
Source dataset ID SRR6211488
Project ID PRJNA415636
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Pancreas endocrine cells ENSDARG00000014190 (sst2) protein_coding marker DOI:10.1038/nbt.4124
    1 Pancreas endocrine cells ENSDARG00000044566 (fabp6) protein_coding marker DOI:10.1038/nbt.4124
    1 Pancreas endocrine cells ENSDARG00000039490 (pitpnaa) protein_coding marker DOI:10.1038/nbt.4124
    1 Pancreas endocrine cells ENSDARG00000033161 (sst1.2) protein_coding marker DOI:10.1038/nbt.4124
    1 Pancreas endocrine cells ENSDARG00000054616 (cldni) protein_coding marker DOI:10.1038/nbt.4124
    2 Bi-hormonal endocrine cells ENSDARG00000035350 (ins) protein_coding marker DOI:10.1038/nbt.4124
    2 Bi-hormonal endocrine cells ENSDARG00000079296 (gcga) protein_coding marker DOI:10.1038/nbt.4124
    2 Bi-hormonal endocrine cells ENSDARG00000040907 (gcgb) protein_coding marker DOI:10.1038/nbt.4124
    2 Bi-hormonal endocrine cells ENSDARG00000040799 (sst1.1) protein_coding marker DOI:10.1038/nbt.4124
    3 Pancreas endocrine cells ENSDARG00000036505 (syt4) protein_coding marker DOI:10.1038/nbt.4124
    3 Pancreas endocrine cells ENSDARG00000094836 (si:ch211-195b15.8) protein_coding marker DOI:10.1038/nbt.4124
    3 Pancreas endocrine cells ENSDARG00000079462 (si:ch211-131k2.3) protein_coding marker DOI:10.1038/nbt.4124
    4 Smooth muscle cells ENSDARG00000002701 (rasl12) protein_coding marker DOI:10.1038/nbt.4124
    4 Smooth muscle cells ENSDARG00000044365 (angptl3) protein_coding marker DOI:10.1038/nbt.4124
    4 Smooth muscle cells ENSDARG00000056795 (serpine1) protein_coding marker DOI:10.1038/nbt.4124
    4 Smooth muscle cells ENSDARG00000062592 (myl10) protein_coding marker DOI:10.1038/nbt.4124
    6 Smooth muscle cells ENSDARG00000045180 (acta2) protein_coding marker DOI:10.1038/nbt.4124
    7 Pancreas duct epithelial cells ENSDARG00000038153 (lgals2b) protein_coding marker DOI:10.1038/nbt.4124
    7 Pancreas duct epithelial cells ENSDARG00000077982 (elf3) protein_coding marker DOI:10.1038/nbt.4124
    7 Pancreas duct epithelial cells ENSDARG00000006207 (gpx1b) protein_coding marker DOI:10.1038/nbt.4124
    8 Pancreas endocrine cells ENSDARG00000010946 (cbsb) protein_coding marker DOI:10.1038/nbt.4124
    9 Monocytes ENSDARG00000009087 (cd74a) protein_coding marker DOI:10.1038/nbt.4124
    10 Pancreas endocrine cells ENSDARG00000053130 (pcp4a) protein_coding marker DOI:10.1038/nbt.4124
    11 Endothelium ENSDARG00000045141 (aqp8a.1) protein_coding marker DOI:10.1038/nbt.4124
    12 Pancreas exocrine cells ENSDARG00000077880 (si:ch211-255i20.3) protein_coding marker DOI:10.1038/nbt.4124
    12 Pancreas exocrine cells ENSDARG00000012539 (dnase1) protein_coding marker DOI:10.1038/nbt.4124
    12 Pancreas exocrine cells ENSDARG00000010146 (cpa2) protein_coding marker DOI:10.1038/nbt.4124

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)