DATASET ID: GSE175406

Basic information

Tissue / Organ ovotestes
Experiment type baseline
Sample The ovotestes of three individual 2-year-old zig-zag eels
Source dataset ID GSM5333024
Project ID GSE175406
Species Mastacembelus armatus

Created with Highcharts 9.3.2cldn7ccnb1cdk1mmp2acta2grb14sla2kdrtcf7cd79aalox5ap图表导出菜单Word Cloud of Markers

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Chondrocytes mmp2 (mmp2) protein_coding marker DOI:10.1016/j.neuron.2020.09.023
    2 Smooth muscle cells acta2 (acta2) protein_coding marker DOI:10.7554/eLife.44431
    3 Leydig cells grb14 (grb14) protein_coding marker DOI:10.1038/s41419-021-03676-x
    4 Immune cells sla2 (sla2) protein_coding marker DOI:10.1073/pnas.1901021116
    6 Endothelium kdr (kdr) protein_coding marker DOI:10.15252/embr.202050612
    7 Fetal germ cells cldn7 (cldn7) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    8 T cells tcf7 (tcf7) protein_coding marker doi:10.3389/fimmu.2021.783196
    9 Germ cells cldn7 (cldn7) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    9 Germ cells ccnb1 (ccnb1) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    9 Germ cells cdk1 (cdk1) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    10 Fetal germ cells cldn7 (cldn7) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    11 B cells cd79a (cd79a) protein_coding marker doi:10.3389/fimmu.2021.783196
    12 Ionocyte progenitors alox5ap (alox5ap) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    15 Germ cells ccnb1 (ccnb1) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194
    15 Germ cells cdk1 (cdk1) protein_coding marker DOI:10.1016/j.aquaculture.2021.737194

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)