DATASET ID: GSE168695 (5dpf)

Basic information

Tissue / Organ embryo
Experiment type baseline
Sample 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
Source dataset ID GSM5158857
Project ID GSE168695
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 NCC ionocytes ENSDARG00000071173 (slc12a10.2) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    1 NCC ionocytes ENSDARG00000060439 (clcn2c) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    1 NCC ionocytes ENSDARG00000044808 (slc4a4b) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    2 Skin ENSDARG00000044356 (tp63) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    3 Ionocyte progenitors ENSDARG00000041413 (adgrg11) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    3 Ionocyte progenitors ENSDARG00000054755 (alox5ap) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000055926 (foxi3a) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000014488 (ca2) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000015654 (ca15a) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000100265 (rhcgb) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000036722 (slc9a3.2) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    5 HR ionocytes ENSDARG00000040252 (atp1a1a.5) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    6 Ionocyte progenitors ENSDARG00000037921 (gng13b) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    8 Ionocyte progenitors ENSDARG00000043196 (rnasel2) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    8 Ionocyte progenitors ENSDARG00000012788 (foxa3) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    10 Skin ENSDARG00000039133 (lamb4) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    10 Skin ENSDARG00000044356 (tp63) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    11 NaR ionocytes ENSDARG00000014496 (trpv6) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    11 NaR ionocytes ENSDARG00000039264 (igfbp5a) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    11 NaR ionocytes ENSDARG00000043406 (slc8a1b) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    11 NaR ionocytes ENSDARG00000002791 (atp1a1a.1) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    15 KS ionocytes ENSDARG00000086248 (kcnj1a.3) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    15 KS ionocytes ENSDARG00000089060 (kcnj1a.5) protein_coding marker DOI:10.1016/j.devcel.2021.03.027
    15 KS ionocytes ENSDARG00000088484 (kcnj1a.6) protein_coding marker DOI:10.1016/j.devcel.2021.03.027

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)