Fish Single-cell RNA Database

GENE ID: ENSDARG00000063578

Symbol	Location	Gene type	Genome version	Species
NA	4: 4626794 ~ 4706893 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000063578 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000063578	NA	4: 4626794 ~ 4706893 (-)
ENSDARG00000019549	cds1	5: 40009958 ~ 40040488 (-)
ENSDARG00000068036	tmem119b	5: 31872049 ~ 31875645 (-)
ENSDARG00000029372	rasa4	5: 59278193 ~ 59391081 (+)
ENSDARG00000035577	cds2	5: 21144269 ~ 21172199 (+)
ENSDARG00000009505	prelid3b	6: 60112200 ~ 60122081 (+)
ENSDARG00000056228	pld1a	2: 25560556 ~ 25632090 (+)
ENSDARG00000034080	plcd1b	2: 21387902 ~ 21438492 (-)
ENSDARG00000030104	sh3bp4	9: 23369294 ~ 23383131 (-)
ENSDARG00000030269	grtp1b	9: 34389976 ~ 34396264 (-)
ENSDARG00000034643	fhl3a	16: 33655890 ~ 33736831 (+)
ENSDARG00000043475	NA	20: 13647987 ~ 13673566 (-)
ENSDARG00000056065	mov10b.2	8: 27630692 ~ 27656765 (-)
ENSDARG00000087152	sowahd	14: 33329420 ~ 33331494 (+)
ENSDARG00000016531	klhl4	14: 26796684 ~ 26843597 (+)
ENSDARG00000101419	drp2	14: 40919736 ~ 41243180 (-)
ENSDARG00000020405	napab	18: 44673990 ~ 44696815 (+)
ENSDARG00000079572	plcd3b	12: 15622621 ~ 15663412 (+)
ENSDARG00000092945	si:ch211-250g4.3	19: 37509638 ~ 37519610 (+)
ENSDARG00000094377	samd10b	23: 13124085 ~ 13332863 (+)
ENSDARG00000079908	tmem151a	21: 25643880 ~ 25645676 (+)
ENSDARG00000036031	sept5b	10: 43936252 ~ 43964028 (-)
ENSDARG00000059123	plcd1a	24: 20372497 ~ 20419254 (+)
ENSDARG00000056462	crp2	24: 38082471 ~ 38085789 (-)
ENSDARG00000062049	arhgap45b	22: 17611836 ~ 17653143 (-)
ENSDARG00000057975	plcd4a	22: 12729329 ~ 12746539 (-)
ENSDARG00000056530	cpamd8	22: 21252790 ~ 21304247 (+)
ENSDARG00000034667	CABZ01090041.1	22: 15633013 ~ 15643059 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type	NA	NA	NA
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	NA	NA	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000063578

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences