Fish Single-cell RNA Database

GENE ID: ENSDARG00000070140

Symbol	Location	Gene type	Genome version	Species
NA	3: 39191815 ~ 39198113 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000070140 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000017794	sdr16c5b	7: 58699718 ~ 58718472 (+)
ENSDARG00000008491	si:ch211-107o10.3	7: 30178253 ~ 30191357 (+)
ENSDARG00000021135	dhrs4	7: 24039464 ~ 24047316 (-)
ENSDARG00000070140	NA	3: 39191815 ~ 39198113 (-)
ENSDARG00000028048	rdh8a	3: 53687645 ~ 53722182 (-)
ENSDARG00000016213	zmp:0000001048	3: 53511936 ~ 53522208 (+)
ENSDARG00000092660	cyp27c1	6: 9568149 ~ 9581949 (-)
ENSDARG00000028862	rdh20	6: 46458416 ~ 46474483 (-)
ENSDARG00000068474	si:dkey-94e7.2	2: 30721070 ~ 30726420 (+)
ENSDARG00000016233	sdr16c5a	2: 11483072 ~ 11504778 (-)
ENSDARG00000069834	pnpla4	1: 32097179 ~ 32111924 (-)
ENSDARG00000105060	rdh8b	1: 59293873 ~ 59303460 (+)
ENSDARG00000019260	dhrs9	9: 48706038 ~ 48736388 (-)
ENSDARG00000054914	dgat1b	16: 30948451 ~ 31000727 (-)
ENSDARG00000034577	si:dkey-23o4.6	16: 38109941 ~ 38118003 (-)
ENSDARG00000041873	si:dkey-221h15.4	20: 38831588 ~ 38836161 (-)
ENSDARG00000080010	adh5	14: 43590816 ~ 43602968 (-)
ENSDARG00000087262	zgc:63568	14: 35892802 ~ 35900420 (+)
ENSDARG00000088366	zgc:77938	14: 35901249 ~ 35911982 (+)
ENSDARG00000024278	adh8b	13: 12633223 ~ 12646752 (-)
ENSDARG00000091211	adh8a	13: 12653975 ~ 12660318 (-)
ENSDARG00000018069	rdh12	13: 33055548 ~ 33065830 (+)
ENSDARG00000069168	si:dkey-73n10.1	18: 18931484 ~ 18942098 (-)
ENSDARG00000033999	cyp26a1	12: 8954761 ~ 8958353 (-)
ENSDARG00000054797	zgc:153441	19: 42418227 ~ 42424599 (-)
ENSDARG00000103503	dgat1a	19: 1370504 ~ 1393308 (+)
ENSDARG00000044982	dhrs3a	23: 21663631 ~ 21674679 (+)
ENSDARG00000044803	dhrs3b	11: 28590733 ~ 28614608 (-)
ENSDARG00000058966	zgc:112332	24: 18448108 ~ 18467064 (-)
ENSDARG00000089205	si:dkey-73n8.3	24: 18469766 ~ 18485491 (-)
ENSDARG00000045277	rdh12l	24: 32573480 ~ 32582880 (-)
--	zgc:109982	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000070140

EXPRESSION

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