Fish Single-cell RNA Database

GENE ID: ENSDARG00000094030

Symbol	Location	Gene type	Genome version	Species
si:dkeyp-3f10.16	6: 52869892 ~ 52871963 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000094030 (si:dkeyp-3f10.16), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000040497	BX004816.1	3: 2971852 ~ 2979129 (+)
ENSDARG00000094030	si:dkeyp-3f10.16	6: 52869892 ~ 52871963 (+)
ENSDARG00000093273	or137-6	6: 52903302 ~ 52905209 (+)
ENSDARG00000090480	ccdc17	6: 33897624 ~ 33910958 (+)
ENSDARG00000022512	zgc:109913	6: 55282629 ~ 55286872 (+)
ENSDARG00000080675	si:dkey-71b5.7	16: 21946091 ~ 22006996 (-)
ENSDARG00000075828	taar14j	20: 46260580 ~ 46261653 (+)
ENSDARG00000094519	si:ch211-152p23.2	8: 41413919 ~ 41440689 (+)
ENSDARG00000095445	si:dkey-191c17.2	8: 33105974 ~ 33109130 (+)
ENSDARG00000092721	si:ch211-67f24.7	13: 36633355 ~ 36638969 (+)
ENSDARG00000091990	olfck2	18: 33310811 ~ 33314836 (+)
ENSDARG00000061903	BX908736.1	18: 33322515 ~ 33331641 (+)
ENSDARG00000056000	olfcq10	18: 33521609 ~ 33526012 (+)
ENSDARG00000094125	or103-2	15: 31435957 ~ 31438111 (+)
ENSDARG00000105827	or126-5	15: 5167690 ~ 5172170 (-)
ENSDARG00000105808	or128-9	15: 5196715 ~ 5198191 (-)
ENSDARG00000095222	or128-7	15: 5205538 ~ 5207805 (-)
ENSDARG00000087635	or128-5	15: 5215807 ~ 5217693 (-)
ENSDARG00000090931	or128-4	15: 5220992 ~ 5222924 (-)
ENSDARG00000087761	or122-1	15: 5287703 ~ 5289199 (+)
ENSDARG00000088846	or111-4	15: 31371190 ~ 31372486 (-)
ENSDARG00000086383	or111-8	15: 31404806 ~ 31406093 (-)
ENSDARG00000018521	or115-1	21: 40202617 ~ 40204435 (+)
ENSDARG00000044343	or115-13	21: 40219818 ~ 40221641 (+)
ENSDARG00000105792	or115-9	21: 40239192 ~ 40242287 (+)
ENSDARG00000092406	or115-8	21: 40254429 ~ 40256146 (+)
ENSDARG00000044337	or115-6	21: 40280027 ~ 40282140 (+)
ENSDARG00000105835	or132-3	21: 25364338 ~ 25365870 (+)
ENSDARG00000043142	or108-3	10: 36178713 ~ 36180091 (+)
ENSDARG00000096168	taar20g	10: 40359577 ~ 40360635 (-)
ENSDARG00000095156	taar20w	10: 40420052 ~ 40421059 (-)
ENSDARG00000094490	taar19k	10: 40513612 ~ 40514643 (-)
ENSDARG00000054237	taar16a	10: 40593443 ~ 40594447 (-)
ENSDARG00000114356	si:ch211-238p8.31	10: 40633990 ~ 40635051 (+)
ENSDARG00000076345	taar19p	10: 40670847 ~ 40672605 (+)
ENSDARG00000109580	taar19n	10: 40700311 ~ 40728693 (+)
ENSDARG00000076191	fbxl13	25: 18766165 ~ 18778356 (-)
--	v2rh11	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000094030

EXPRESSION

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