Fish Single-cell RNA Database

GENE ID: ENSDARG00000095634

Symbol	Location	Gene type	Genome version	Species
si:ch211-66k16.2	2: 45454415 ~ 45456892 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000095634 (si:ch211-66k16.2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000014910	panx1b	5: 37840914 ~ 37852508 (+)
ENSDARG00000095634	si:ch211-66k16.2	2: 45454415 ~ 45456892 (+)
ENSDARG00000003244	gbp3	2: 43894368 ~ 43918874 (+)
ENSDARG00000005314	NA	1: 49501171 ~ 49505449 (-)
ENSDARG00000037292	chrm1a	14: 24258562 ~ 24262815 (+)
ENSDARG00000077021	calhm1	13: 25412307 ~ 25417915 (+)
ENSDARG00000028469	rps6ka2	13: 7086735 ~ 7157062 (+)
ENSDARG00000071298	chrm3b	12: 47424427 ~ 47430918 (+)
ENSDARG00000025285	panx1a	15: 2475894 ~ 2489934 (+)
ENSDARG00000038278	ptgir	15: 9117330 ~ 9184449 (+)
ENSDARG00000103146	nlrc3	24: 37449893 ~ 37466754 (+)
ENSDARG00000039164	mhc1uma	22: 3910610 ~ 3914222 (-)
ENSDARG00000059039	FO904903.1	22: 3914318 ~ 3929075 (+)
ENSDARG00000017722	chrm4b	25: 7882847 ~ 7887274 (-)
ENSDARG00000116374	chrm2b	25: 21046856 ~ 21061911 (+)
ENSDARG00000051711	CR339041.2	25: 10929790 ~ 10935577 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (2dpf)	head	baseline	2dpf, untreatment	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000095634

EXPRESSION

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